>Q8NA42 (140 residues) KSYECKECGKFFSCGSHVTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKKPYE CKECGKAFSYCSNLIDHQRIHTGEKPYECKVCGKAFTKSSQLFQHARIHTGEKPYECKEC GKAFTQSSKLVQHQRIHTGE |
Sequence |
20 40 60 80 100 120 140 | | | | | | | KSYECKECGKFFSCGSHVTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKKPYECKECGKAFSYCSNLIDHQRIHTGEKPYECKVCGKAFTKSSQLFQHARIHTGEKPYECKECGKAFTQSSKLVQHQRIHTGE |
Prediction | CCCCCCCCCCSSCCCCCCCCSCCCSCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCCHHHSCCCCCC |
Confidence | 98457888765544333111002125889821788876544423321110323588980278887654443340110022158998126878764044334110212125889812788876523422212100233799 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | KSYECKECGKFFSCGSHVTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKKPYECKECGKAFSYCSNLIDHQRIHTGEKPYECKVCGKAFTKSSQLFQHARIHTGEKPYECKECGKAFTQSSKLVQHQRIHTGE |
Prediction | 75464774113033414044133313343326377411203341414413331344332637742120334141441333134433263774122033424044133313433326477421303341414413342468 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCSSCCCCCCCCSCCCSCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCCHHHSCCCCCC KSYECKECGKFFSCGSHVTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKKPYECKECGKAFSYCSNLIDHQRIHTGEKPYECKVCGKAFTKSSQLFQHARIHTGEKPYECKECGKAFTQSSKLVQHQRIHTGE | |||||||||||||||||||
1 | 5v3jE | 0.45 | 0.44 | 12.74 | 1.17 | DEthreader | EKPKCECGK-AFRY-DTQLSLHLLTHAARRFECK-DCDKVYSASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTG- | |||||||||||||
2 | 6ml2A | 0.46 | 0.45 | 13.14 | 4.96 | SPARKS-K | KSFTCDQCGKYFSQKRQLKSHYRVHTSLP--ECSHCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCSICGKCFSDSSAKRRHCILHTGKKPFSCPECGLQFARLDNLKAHLKIHSKE | |||||||||||||
3 | 2i13A | 0.58 | 0.56 | 16.21 | 1.03 | MapAlign | KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH--- | |||||||||||||
4 | 2i13A | 0.58 | 0.56 | 16.21 | 0.84 | CEthreader | KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH--- | |||||||||||||
5 | 5v3jE | 0.58 | 0.57 | 16.41 | 3.41 | MUSTER | KPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- | |||||||||||||
6 | 5v3jE | 0.58 | 0.57 | 16.41 | 1.63 | HHsearch | KPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- | |||||||||||||
7 | 5v3gD | 0.58 | 0.58 | 16.62 | 2.15 | FFAS-3D | KPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGE | |||||||||||||
8 | 5v3gD | 0.58 | 0.58 | 16.62 | 1.37 | EigenThreader | KPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGE | |||||||||||||
9 | 5v3mC | 0.56 | 0.56 | 16.04 | 7.33 | CNFpred | KCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGD | |||||||||||||
10 | 5t0uA | 0.32 | 0.27 | 8.18 | 1.17 | DEthreader | THKCH---LCGRAFRTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTH--SG-----------EKP---YECYICHA-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |