>Q8N8Y5 (198 residues) MEKPAGRKKKTPTPREEADVQKSALREEKVSGDRKPPERPTVPRKPRTEPCLSPEDEEHV FDAFDASFKDDFEGVPVFIPFQRKKPYECSECGRIFKHKTDHIRHQRVHTGEKPFKCAQC GKAFRHSSDVTKHQRTHTGEKPFKCGECGKAFNCGSNLLKHQKTHTGEKPYECTHCGKAF AYSSCLIRHQKRHPRKKP |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MEKPAGRKKKTPTPREEADVQKSALREEKVSGDRKPPERPTVPRKPRTEPCLSPEDEEHVFDAFDASFKDDFEGVPVFIPFQRKKPYECSECGRIFKHKTDHIRHQRVHTGEKPFKCAQCGKAFRHSSDVTKHQRTHTGEKPFKCGECGKAFNCGSNLLKHQKTHTGEKPYECTHCGKAFAYSSCLIRHQKRHPRKKP |
Prediction | CCCCCCCCCSCCCCCCCSSCCCCCCSSSCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSSCCCCCCSSCCCCCCSSSSCCSCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCC |
Confidence | 998889978068888762024565443112168888147877862045554434454463677886514554330132322698881078788754443342112032158998127878875134334001103215899912787887414533321120221589980178887740443332001134479797 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MEKPAGRKKKTPTPREEADVQKSALREEKVSGDRKPPERPTVPRKPRTEPCLSPEDEEHVFDAFDASFKDDFEGVPVFIPFQRKKPYECSECGRIFKHKTDHIRHQRVHTGEKPFKCAQCGKAFRHSSDVTKHQRTHTGEKPFKCGECGKAFNCGSNLLKHQKTHTGEKPYECTHCGKAFAYSSCLIRHQKRHPRKKP |
Prediction | 865254643340741342034433041323044533240651143034424045443304174421013331403413414332331435553314334240342323332333154655330434424034232333333325464533143341403423233121331447642203334230342323136648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCSCCCCCCCSSCCCCCCSSSCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSSCCCCCCSSCCCCCCSSSSCCSCCCCCSSCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCC MEKPAGRKKKTPTPREEADVQKSALREEKVSGDRKPPERPTVPRKPRTEPCLSPEDEEHVFDAFDASFKDDFEGVPVFIPFQRKKPYECSECGRIFKHKTDHIRHQRVHTGEKPFKCAQCGKAFRHSSDVTKHQRTHTGEKPFKCGECGKAFNCGSNLLKHQKTHTGEKPYECTHCGKAFAYSSCLIRHQKRHPRKKP | |||||||||||||||||||
1 | 5t0uA | 0.33 | 0.22 | 6.68 | 1.00 | DEthreader | --------------------------------------------------------T--HKCHAFTVTLLR----NHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE-- | |||||||||||||
2 | 5v3gD | 0.42 | 0.36 | 10.54 | 4.68 | SPARKS-K | ---PGSEKPYVCRECGRGFSNKSHLLRHQRTHT---------------------GEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT---- | |||||||||||||
3 | 5v3jE | 0.32 | 0.31 | 9.43 | 1.00 | MapAlign | EKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGAHQMSHTGEKPHKCKECGKGFISVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH----- | |||||||||||||
4 | 2i13A | 0.42 | 0.32 | 9.35 | 0.74 | CEthreader | ------------------------------------------FSRSDHLAEHQRTHKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH----- | |||||||||||||
5 | 5v3gD | 0.43 | 0.37 | 10.80 | 3.41 | MUSTER | ---PGSEKPYVCRECGRGFSNKSHLLR-RTHTGEKP----------------------YVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT---- | |||||||||||||
6 | 5v3jE | 0.35 | 0.35 | 10.55 | 1.41 | HHsearch | GEKPYDEKCFECKECGKAFMRPSHLLRHRIHTGEKPHKCKECGKAFRYHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKP | |||||||||||||
7 | 5v3gD | 0.42 | 0.35 | 10.39 | 2.07 | FFAS-3D | ----SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKP----------------------YVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT---- | |||||||||||||
8 | 5v3gD | 0.46 | 0.34 | 9.87 | 1.15 | EigenThreader | -------------------------------------------------PGSEK---PYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKP | |||||||||||||
9 | 5v3gA | 0.46 | 0.33 | 9.73 | 6.17 | CNFpred | ------------------------------------------------------SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKP | |||||||||||||
10 | 5v3gD | 0.47 | 0.32 | 9.26 | 1.00 | DEthreader | ------------------------------------------------------------VCRECGRGF-DKSHLLSHRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRT-HT--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |