>Q8N8V8 (129 residues) MLLKVRRASLKPPATPHQGAFRAGNVIGQLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSP PRSPWGDCAEPSCLCEMKIRRRRHEGPAWGQSGFLAGGLHLVPSSLSLAACGVVRMKGLW GRGAGIRGR |
Sequence |
20 40 60 80 100 120 | | | | | | MLLKVRRASLKPPATPHQGAFRAGNVIGQLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSPPRSPWGDCAEPSCLCEMKIRRRRHEGPAWGQSGFLAGGLHLVPSSLSLAACGVVRMKGLWGRGAGIRGR |
Prediction | CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCSSSCCCCCCHHHCCSSSSSCCCCCCCCCCCC |
Confidence | 930123330478999764541113168999999999999997356044238888999999999976567853101224443314688644244113660443554793342336541111356565689 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MLLKVRRASLKPPATPHQGAFRAGNVIGQLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSPPRSPWGDCAEPSCLCEMKIRRRRHEGPAWGQSGFLAGGLHLVPSSLSLAACGVVRMKGLWGRGAGIRGR |
Prediction | 632424435154343445222422410120023122321232143232252344447554444423524424110424144444734423432212421322354143313112314311343353568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCSSSCCCCCCHHHCCSSSSSCCCCCCCCCCCC MLLKVRRASLKPPATPHQGAFRAGNVIGQLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSPPRSPWGDCAEPSCLCEMKIRRRRHEGPAWGQSGFLAGGLHLVPSSLSLAACGVVRMKGLWGRGAGIRGR | |||||||||||||||||||
1 | 5ltdA2 | 0.11 | 0.07 | 2.51 | 0.49 | CEthreader | ----------------------------------------ALSPSSENNYLAYPSPNGDVIIFDAKTLQPTSVIEAHRTSLAAIALSKLLATASDKGTIIRVFSVATGIKLYQFRRGTYPT-------- | |||||||||||||
2 | 4issA1 | 0.09 | 0.09 | 3.51 | 0.47 | EigenThreader | ELLENLLKSQKPAPEDPAWISLIPVEDLHHQWNILQSKELLRDAGAKTNLDQFATGLVGTRSPYSGGSSAGSASVSLGTDTGRVPAALNNLIGLKPLDCVSVFALNLSDAEIAFKVNKPDLLEDEYSRE | |||||||||||||
3 | 1iieA | 0.25 | 0.11 | 3.36 | 0.32 | FFAS-3D | LLQNADPLKVYPPLK--------GSFPENLRHLIDWKVFESWMHHWLLFEMSRHSLEQKPTDAP----------------------------------------------------------------- | |||||||||||||
4 | 6ahfC1 | 0.10 | 0.10 | 3.72 | 0.82 | SPARKS-K | RALTILTLAQKLASDHQHPQLQPIHILAAFIEDGSVPYLQNLIEKGRYDYDVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIFKEAQVDAIKQQALELRGNTRI | |||||||||||||
5 | 6bw5A | 0.17 | 0.04 | 1.28 | 0.40 | CNFpred | -------------------CYFAGMTFAVVGILGHFSKTMLLFFMPQVF-------------------------------------------------------------------------------- | |||||||||||||
6 | 4a01A | 0.04 | 0.04 | 1.93 | 0.83 | DEthreader | GTSVGLGMKATYARTLEARKGVGKAFITAFRSGAVMGFLLAAGLGLGSALFGR-------VGGGI--K-VGAGMGDLKLGLIIGPAI--AALMLST-IATGAIDAYGPIDG-TAGKGFASALVSAVEV- | |||||||||||||
7 | 1vt4I | 0.14 | 0.12 | 4.26 | 0.82 | MapAlign | -----------KFYKPYICDNDPKYERLVNAILDFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
8 | 5gupV | 0.17 | 0.16 | 5.37 | 0.47 | MUSTER | KTLLHKYSDIPEGTECHRKAYAST-SIGGATGLIVSAYSIALKPPASFLEGVARTGRYTFTSAAIG-AIFGLTSCISAQVREKPDDP-LNYGGCAGGLTLGARTSYGIGAAACAYMGLTMGQLEGWQVF | |||||||||||||
9 | 1vt4I3 | 0.17 | 0.13 | 4.32 | 0.97 | HHsearch | ------------------------------EYALHRSIVDHYNIPKTFDSDD-LIPPYLDEHPERTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLPKIEENLICDLLRIALMAEDEAIFEKQ | |||||||||||||
10 | 1vt4I | 0.13 | 0.13 | 4.56 | 0.43 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |