Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVEDLAASYIVLKLENEIRQAQVQWLMEENAALQAQIPELQKSQAAKEYDLLRKSSEAKEPQKLPEHMNPPAAWEAQKTPEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTVLEGQGPANTQDATIAQEPKNSEPQDPPNIEKPQEAPEYQETAAQLEFLELPPPQEPLEPSNAQEFLELSAAQESLEGLIVVETSAASEFPQAPIGLEATDFPLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLDIQSPLLEQCESFIPVLQDTFDNPENMKDANQCIHQLCQGEGHVATHFHLIAQELNWDESTLWIQFQEGLASSIQDELSHTSPATNLSDLITQCISLEEKPDPNPLGKSSSAEGDGPESPPAENQPMQAAINCPHISEAEWVRWHKGRLCLYCGYPGHFARDCPVKPHQALQAGNIQACQ |
1 | 6zngA | 0.07 | 0.07 | 2.80 | 1.16 | MapAlign | | IGPAAGKPVMEGKGILFKQFADVDVFCNAVRVLEPTHGTAIVSGAALLNACSITNRKMETVRIVVNGAGASANSCAKIFIALGARRENIIMCDSQGVIEARTLTEALRGADVFVGLSVAGALTPEMLKDMAKDPIIFAMANPEPEITPDKARAARPDAIIATGRSDYPNQVNNVLGFPSIFRGALDTRSTQINEEMKLAAVHALAKLAWVAPEVAKAAMKSGVARVHQNSAANGGELPRIVFPEGTSTKVLKALATLVEEKI-CQPILLGYPERVKEKIKASSHPKYFSFVEKLYSLAERLMADPNYFAAMMVNQINYADAVRPILQTIPAGLLEDKFLVLADTTVNLNPTAQCAQIALQAAKIMLSYSNFSGAEGTPRK-MKKAAEIARSLEGDMQADTAVNPEIMERLFPFSGLKGGANVLVFPNLESSNIAYKLIQQVIGPFSANVLQNSVV-FTALEAQYIKEVLK----- |
2 | 6r24A | 0.18 | 0.06 | 1.86 | 2.29 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSHKLKNFISEIMLNMSMIS--WPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGINQRFRKIWDRDFMTEKAAIMTYTRLLTKETYN-IVRMHKPETLKDAMEEAYQTTALTERFFPG------------------------------------------------------------------------- |
3 | 1vt4I3 | 0.06 | 0.06 | 2.48 | 0.67 | CEthreader | | ----------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6gmhQ | 0.04 | 0.04 | 1.98 | 1.00 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFILGSLYAASEDIAKGHLKKVTEQYPDDVEAWIELAQILEQTILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQI |
5 | 6r24A | 0.17 | 0.05 | 1.80 | 0.93 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSHKLKNFISEIMLNMSMIS--WPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLRLNQRFRKIWDRMFMTEKAAIMTYTRLLTKETYNIVRMHK-PETLKDAMEEAYQTTALTERFFP-------------------------------------------------------------------------- |
6 | 5mqfM | 0.07 | 0.06 | 2.63 | 0.90 | SPARKS-K | | SAEEYIEYLKAAQRLATVVNHELCDLISVDAIIRGGLTRFQLGKLWCSLADYYIRSGEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMEREEEDDVDLELRLARFEQLI-SRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELLRLLRKATALPARRAEYFDGSEPVQNR-----------VYKSLKVWSMLAVYDRILDLRIATIVINYAMFLEEHKYESFKAYERGISLFKWPSDIWSTYLTKFIARYGGRKL-ERARDLFEQALKYAKTLYLLYAQLEEEWGLARMAVYERATRAVEPGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTRHGNEDTIKEMLRIRRSVQATYNTQV------------------------- |
7 | 6gseA | 0.15 | 0.05 | 1.63 | 0.83 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPGLDTQIEDPREFLSHLEEYLRQVG---GSEEYWLSQIQNHMNGPAKKWWEFKQG----SVKNWVEFKKEFLQYSEGTLSREAIQRELDLPQKQGEQFLWRKRDLYQTLYAEEEEIIQYVVGTLQPKFKRFLRH-PLPKTLEQLIQRGMEVQDGLEQAAE-------------------------------------------------------------------------- |
8 | 6jxaA | 0.06 | 0.04 | 1.55 | 0.67 | DEthreader | | ----------------------------Y--LLLSENRLSTISYFKSCEAVPELMLVDK--------------------IFQCFSVIDT-------E----------------------------AIRPQWSDCNDILDWII-SRFEDNSFTGV---------------------------------------------------------GPPQQSIEKSAFSLAMRFTLTERSTKTYLSP-------------FLSVITDLKRCARELTQIHDEVITIFSLLEELNLFKIFIYLRENKQL---------W--CLDASDCGVDVLSKAAAI---------NILKHHVPKLSFKLWFAALSRRILQ------L-ILSLLIFDRWMDTLNTIDFYDHKYVIPALWEESTFLDLLKFCGWFWNQIASILSVMSIYDLRQDAIMEFYKVVPLGPKAGIIEF----------------E |
9 | 2pziA | 0.08 | 0.06 | 2.45 | 1.13 | MapAlign | | AEAQAMAMAERQFLAEAIAYLLEILPALSYLHSTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSY--GRLLRRAIDPDPRQRFTTAEEMSA------------------------------------------------------------------------------------------QLTGVLREVVAQDVAHTDVYLDANEIVTALSVPLVDPTDVAASVLQATSQPVQTLDSLRELPLMEVRA-LLDLGDVAKATRKLDDLAWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTGELAPKLALAATFYQTVWDGVISAAFGLARARSAEGD-RVGAVRTLDEVPRHFTTARLTSAVTLLVTEEQIRDAARRVEAL----------------------------PPTEPRVLQIRALVLGGALLILGFPFTSHGLRLGVEASLRSLARVAPTQRH |
10 | 6rd41 | 0.12 | 0.12 | 4.16 | 0.64 | MUSTER | | RTQNLKAG-DVPKFFDTVISTRASAAIASKDKFWAGRKTEAEAASAKASAAFPRVAVPEWKKGKTVSIENLNTVTDKYAAAL-VPKRKLALPVLPEGVKKAV--EDFAASVGQAKNASEVSELLAKSLAEKAVVTEGGKVVEGFSYVSKAVAAKVIATRRAEVHERLLKSPELAIVPLNEFDAQLASKFEGISPK-YQELLSAVAQGNKTFAQRLNSSPAFSSFLLKREKAESEVPPSELELEAAQKAAELEDPEVALRTLLGPQMEALGALSEQIRVITEHRYTPDRLQYKEGMKLADKIAAQEAALKEELKVIYGDKHFQASPRTPVQQLFDSLKNAAANKERAAKEAAAASPYLAYAVTKKFDEVLYPQLSEELLELELSDIREDEIALEKAEEEELWLLTLTQQFKHIQKHFGIDLPHSVVAHMDPLLIKKIDWETTNAL----NLSHHFLPLIRYRRDLAKNGDRYGPDL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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