Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCSSSSHHHHHHHCCCCCSSSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCSSSCCCCCCCCCSSSSSSSCCSSSSSSCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCSSCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSCCSSSHHHHHHHHHCCSSSSSCCCSSSCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCSSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC MASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSKDKRIKSGKQSSTSKLLRDSRGPSVEKLSHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSSGGDRATKTVSYRTTPSGLQIMPLKKSQNGMENGDAGSEKDERHFGNGSHQPGLDLNDHVGEQDMGECDVNHATLAENGLGSALTNGGLNLHSPVKRKLEAEKDYVFDKRLRYSVRQNESNCRFRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSKGLDSLFSYLQDKIYEV |
1 | 2fw2F | 0.58 | 0.30 | 8.62 | 2.23 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF |
2 | 6eqoA | 0.12 | 0.12 | 4.23 | 0.84 | MapAlign | | -----DAEYPNFIIYTSGSTGKPKGVVHVHDPGWITGQSYQIAASVSPAVQAFAMEHRGDEVRYADTYWRRWKGAWAYTQGDFAMRHPDGSFSLHGRSDDVINVSGHRIGTEEIEGAILRDKALDPNSPVGNVIVIGAPHSQKGVTPIAFVTPVEGRRLTQDDKRRLTDL--VRTEKGAVAVPQDFIELSEFPETRSGKYMRRMVRAVVEGGEVLRNPESLDELAR--AVDGWKRRQSLSDTQALFERYRFFTIQYNKRVATVTVKN--PPVNALNERALDELVIIAEHLARKDVAAVVFTGSGASFVAGADIRQMLEEVN--SVEEAKALPDNAQLAFRTIEEMDKPCIAAIQGVALGGGMEFALACHYRVAEPKARFGQPEINLRLLPGYGGTQRLPRLLGLRDALDLILGGRAIDADAALAVGAVDALADN--ALSHAHAMVREFVAGRDKAGERALDAVRTGWTQGMTAGLECEAQRFAEAIIDPGGKTGIQQFMDKQSPPL |
3 | 6eqoA3 | 0.16 | 0.09 | 3.14 | 0.28 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRNPESLDELARAVDGWKRRQSLSDTQALFERYRFFTIQYNLVAPGKRVATVTVKNPP--VNALNERALDELVIIAEHLARKDVAAVVFTGSGASFVAGADIRQMLEEVNS--VEEAKALPDNAQLAFRTIEEMDKPCIAAIQGVALGGGMEFALACHYRVAEPKARFGQPEINLRLLPGYGGTQRLPRLLALRDALDLILGGRAIDADAALAVGAVDALADGDNALSHAHAMVREFVRGRDKAGERALDAVRTGWTQGMTAGLECEAQRFAEAIIDPGGKTGIQQFMDKQSPPL |
4 | 6eqoA | 0.13 | 0.12 | 4.12 | 0.98 | EigenThreader | | PVFPHAGRFASIIERYGVN------VFKAGVYDLSSLKAEPV----SPAVQAFAMEHI-----THRYWATEHGGMVFADADGFPLEADAPWIMADGSSNGPVEYERDTPEDGEKLPYPYLTRTIWGDVENFTVEHVG-----NLARVAGGWRGD--------EVRYADTYWRRWKGEGRRLTGAVAVPQDFIELSEFPETRSGKYMAVVEGGEVLRNPESLDELARAVDGWKRRQSLSDTQ------ALRFFTIQYNLGKATVTVKNPPV--NALNERALDELVIIAEHLARKDDVAVVFTGSGTASFGADIRQMLEEVNS---VEEAKALPDNAQLAFRTIEEMDKPCIAAIQGVALGGGMEFALACHYRVAEPKARFGQPEINLRLLPGYGGTQRLPRLLGLRDALDLILGGRAIDADAALAVGAVDALADGSDNFLQRILNQLEWAGRDKAGERALDAVRTGWTQGMTAGLECEAQRFAEAIIDPEGGKTGIQQFMDKQSPPL |
5 | 2fw2F | 0.58 | 0.30 | 8.62 | 1.41 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF |
6 | 2np9A | 0.14 | 0.11 | 3.76 | 1.28 | MUSTER | | -----------------------------------------------------------------------------------------------------TDGLWAALTEAAASVEKLLATLPEHGARSSAERAEIAAAHDAARALRVRDTHADATDHRRVHLRELVEAAATAFPGLVPTQQQLAVERSLPQAAKEGHEIDQGIFLRAVLRSPLAGPHLLDAMLRPTPRALELLPEFV---RTGEVEMEAVHLERRDGVARLTM-CRDDRLNAEDGQQVDDMETAVDLALLDGVRVGLLRGGKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVLTNEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGA-ANLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---DAVLANRRMLNLADESGFRAYMAEFALMQALRLYGHDVIDKVGRFG------- |
7 | 5mrc88 | 0.18 | 0.09 | 3.02 | 1.20 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APPVLFTVQDTARVITLNR-PKKLNALNAEMSESMFKTLNEYAKSDTNLVILKSSNRSFCAGGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPDVGSTFALPRIVNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDAFAQEIKTKLLTKSPSSLQIALRLVQENSRDHIESAIKRDLYTAANMCMLVEFSEATKHKLIDKPYPW |
8 | 6eqoA | 0.17 | 0.10 | 3.31 | 0.83 | DEthreader | | -----------------------------------------------------------------------------------------------VPPSYDP-DN-------------------------------ERSDVMRGALDPNSPV-----LTQDDKRRLTDVRAVPQDF--IELSE------------------------------------R--VVEGGEVLAVDKRRQSLSDTQALFERYRFFTIQYNVRVATVTVKNP--PVNALNERALDELVIIAEHLARKDVAAVVFTGSGASFVAGADIRQMLEEVN--SVEEAKALPDNAQLAFRTIEEMDKPCIAAIQGVALGGGMEFALACHYRVAEPKARFGQPEINLRLLPGYGGTQRLPRLLGLRDALDLILGGRAIDADAALAVGAVDALADSDNALSHAHAMVREFVRSGDGKAFAARKTQTQSWHEPAS---------------------------------- |
9 | 2fw2F | 0.59 | 0.30 | 8.62 | 2.83 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE- |
10 | 2fw2A | 0.59 | 0.30 | 8.62 | 2.42 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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