>Q8N8L6 (244 residues) MAPRPLGPLVLALGGAAAVLGSVLFILWKTYFGRGRERRWDRGEAWWGAEAARLPEWDEW DPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTK DFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDPDLPV VVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPAGPTFEEPGTVHIWKLLL ELLS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MAPRPLGPLVLALGGAAAVLGSVLFILWKTYFGRGRERRWDRGEAWWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPAGPTFEEPGTVHIWKLLLELLS |
Prediction | CCCCCCCCSSSSSCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHCCCCCCCSCCCCCCSSSSSSSCCSSSSSSSCCCCHHHHHHHHHHCCCCCSSSSSSSCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCHHHHHHHHCCHHHHCCCCCSSSSSCSCCCCCCHHHHHHHHHHHHHHHHHC |
Confidence | 9987777616752433665413022113334565431111254212222013453333456555433333356774589999878998579999999549976650687174589999899999987589981266789975046854899972671679999999999866513998399998655787899999999995985452589728998335489987444799999999999859 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MAPRPLGPLVLALGGAAAVLGSVLFILWKTYFGRGRERRWDRGEAWWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPAGPTFEEPGTVHIWKLLLELLS |
Prediction | 7654424301110323232112102201332264446442464542243445444634544466365445404635401000000330100000210355342742301311203304356130202100214301300232144331000001023320022024003402552540000000012126621427303730506504754410000002035153042003310240035128 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCSSSSSCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHCCCCCCCSCCCCCCSSSSSSSCCSSSSSSSCCCCHHHHHHHHHHCCCCCSSSSSSSCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCHHHHHHHHCCHHHHCCCCCSSSSSCSCCCCCCHHHHHHHHHHHHHHHHHC MAPRPLGPLVLALGGAAAVLGSVLFILWKTYFGRGRERRWDRGEAWWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPAGPTFEEPGTVHIWKLLLELLS | |||||||||||||||||||
1 | 2j69A | 0.17 | 0.14 | 4.45 | 1.00 | DEthreader | -----------------QVATDRFIQDLERVAQVRSEVC------------------------------S-NLQQGVFRLLVLGDMKRGKSTFLNALIGENLLPSDNCTAVLTVLRYTLLQKGIEIVDSPGLNDTEARSLGYVNNCHAILFVMRASQP-CTLGERRYLENYIK-GRGLTVFFLVNAWDQVSERLRQVFNANLAEYCTVEGQIYRVFELSSIQARRRNALDGFPKFMDSLNTFLT | |||||||||||||
2 | 6bbpA2 | 0.31 | 0.24 | 7.19 | 1.44 | SPARKS-K | ----------------------------------------DPFYDMLATRKRRI-------ANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVT-TIPTVGFNVETVTYKNVKFNVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSC-ATSGDGL-----YEGLTWLTSNYN | |||||||||||||
3 | 6bbpA | 0.25 | 0.24 | 7.49 | 0.53 | MapAlign | PGEAQKIDRMMEAFASRYVLSFAIIMLNTSLHEEKEEWMKSIKASISRDPFYDMLATRKRRIANKKGKVLSKIFNKEMRILMLGLDAAGKTTILYKLKLGQSV-TTIPTVGFNVETVTYKNVKFNVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATS------GDGLYEGLTWLTSNY- | |||||||||||||
4 | 4m9qA | 0.29 | 0.20 | 6.00 | 0.36 | CEthreader | -------------------------------------------------------------------------GPRKITIALLGLDNAGKTTLLNSIQGEDRD--TTPTFGFNSTTLNEGKYKIEVFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQRDKPICIFANKQDLPTAAPAAEVVKGLGLATC--RNSHNVFPCTAKMPAGQDVDHRLRDGLKWLVGTVD | |||||||||||||
5 | 3o47A | 0.29 | 0.26 | 8.00 | 1.08 | MUSTER | MDKKDIELEKMKAGGNAKFREFLES-------QEDYDPCWSLQEKYNSRAAALFRDKVVALAEGRELESWTPPQKKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEYKNISFTVWDVG-----RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRN--WYIQATCATSGDG-----LYEGLDWLSNQLR | |||||||||||||
6 | 4m9qA | 0.30 | 0.20 | 6.10 | 0.88 | HHsearch | -------------------------------------------------------------------------GPRKITIALLGLDNAGKTTLLNSIQGEDR--DTTPTFGFNSTTLNEGKYKIEVFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQRDKPICIFANKQDLPTAAPAAEVVKGLGLATCR--NSHNVFPCT-AKMPAGQDDHRLRDGLKWLVGTVD | |||||||||||||
7 | 5di3A | 0.36 | 0.24 | 7.08 | 2.09 | FFAS-3D | ----------------------------------------------------------------------------EARILVLGLDNAGKTTILKALSEEDITTIT-PTQGFNIKSLSRDGFNLKIWDIGGQKSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEETGVPLLVFANKQDLVGALAADEIASTLDLTSIRDRP--WQIQACSAKQGTGLKEGMEWMMKQVKLE--- | |||||||||||||
8 | 5m1jA6 | 0.12 | 0.12 | 4.18 | 0.67 | EigenThreader | FDDYLNDDEYDLMNEVFPTLKAQLQ--------DYQGWDNNFDLESTLAELKKTVQRYYKPKKPHDISAFVKSALPHLSFVVLGHVDAGKSTLMGRLLFAWIERERGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFESGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSFEEIKSKLLPYLVDIGFFEDNIVPISGFSGEGVYKIELMSTLENAAFKISK | |||||||||||||
9 | 1zd9A | 0.33 | 0.22 | 6.53 | 1.44 | CNFpred | ---------------------------------------------------------------------------EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQ-DREICCYSISCK------EKDNIDITLQWLIQHSK | |||||||||||||
10 | 2j3eA | 0.15 | 0.11 | 3.87 | 1.00 | DEthreader | ----------------PAATQEKLIEFFGKLK-Q------------------------------------KD--MNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSQEGLRPVMVSRTMGGFTINIIDTPGLNQALELIKGFLVTIDVLLYVDRLDVYAVDELDKQVVIAITQFGKEIKTLLVLTHAFSPPFKRSDSLLKTIRARKEFEDSAIAVVYAENSGRCSKDEKAWIPNLVKAITDVAT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |