Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC MALPPFFGQGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASAEASRGGGGAGAFYPVPPPPLPPPPPQCRPFPGTDAGERPRPPPPGPGPPWSPRWPEAPPPPADVLGDAALQRLRDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVRARLLRALRLVRRLRGLSQALREAEADGAAWVLLYSQTAPLRAELAERLQPLTQAAYVGEARRRLERVRRRRLRLRERAREREAEREAEAARAVEREQEIDRWRVKCVQEVEEKKREQELKAAADGVLSEVRKKQADTKRMVDILRALEKLRKLRKEAAARKGVCPPASADETFTHHLQRLRKLIKKRSELYEAEERALRVMLEGEQEEERKRELEKKQRKEKEKILLQKREIESKLFGDPDEFPLAHLLEPFRQYYLQAEHSLPALIQIRHDWDQYLVPSDHPKGNFVPQGWVLPPLPSNDIWATAVKLH |
1 | 6yvuB | 0.12 | 0.08 | 2.90 | 1.09 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------QMKPKAEKESDDEDIILIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQELKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKLAKKTHKQELQDLILDLKKKL--NSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAME----------------------------------- |
2 | 6yvuA | 0.09 | 0.08 | 3.19 | 1.06 | SPARKS-K | | DLKQREDKLKSHYYQTCKNSEYLKRRVTNLEFNYTKPYPNFEASFV--HGVVGQLFQIDNDNQDSQTATQLLRLRKRVTIIPLDKIYTRPISS--------QVLDLAKKIAPGKVELAINLI---------RFDESITKAMEFPETAKKITFHPKIRARTLSGGSRESLDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKELNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKIIEDEKFQELRKKVNPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKRETLVKTWEKVTLDFGNIFADLLPNS |
3 | 6z6fD | 0.06 | 0.05 | 2.15 | 1.16 | MapAlign | | ----------------------------------------------------------GDYWLPTTMSLYQKELTDQIVSLHYSDILRYFETSHYKEDVILESMKTMCLNGSLVATHPYLLIDHYMPKSLITRDVPAHLAENSGKFSVLRDLINLVQEYETETAIVCRPGRTMDLLEALLLGNAINSIDHCRLFFGKFDKNSREYLENVAAMVILRDVERSLLTEVHFKKNSSNVNYHLSSGIITHKLIQSMGEVYMDICVQKQELDDYQNDHLKFFSNEDEKIIKEYETVLRTNNENLNRSHELEVENNLKFSQIETLEKDIETLKGSLMAQGESKLKDAFVKTDNVQDEIEKEERVSVSRDTEKKYMEQEIKRAVDAIRENEEETHKLNEKQNGLESELKLKFEKSEIST------------KELNEKIGFLKKELKLENDLNEELVGQ---------------------LSKTMDNLENLT- |
4 | 1vt4I | 0.12 | 0.08 | 2.69 | 1.05 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------MDFETGEHQYQYKDILSVFEDAFVDNFDDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK---QEEMVQKFVEEVLRINYKFLMSPTEQRQPSMMTRMYIEQ----RDRLYNDNQLKLRQALLELWVALDVCLSYKVQCKMDFKIFWL-----------NL-----------KNCNSPETVLEMLQKLLYQIDP-----NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPDEVKSLLLKYLDCRPQDLPREVLRRLSIIAESIRDGLATWDNWKHVNC------------DKLTTIIESSLNVLAEYRKMFDRLSVFPSHHKYSLVEKQPKESTISIPSIYLELKVKL |
5 | 6z6fD | 0.08 | 0.07 | 2.89 | 0.75 | CEthreader | | TMCLNGSLVATHPYLLIDHYMPKSLITRDVPAHLAENSGKFSVLRDLINLVQEYETETAIVCRPDFSCTVHLFSSEGINFTKYPIKSKARFDMLICLDTTVDTSQKDIQYLLQYKRRYAPIVRLVAINSIDHCRLFFGKKFDKNSREYLENVTAAMVILRDRLGTLPPDLRPIYSQKLHYLVEWLENPTVPWPLPDIYPLKQYTSMDVERSLLTEVHFKKNSSNVNYHLSSGIITHKLIQSMGEVYMDICVQKQELDDYSCLDDLQNDHLKFFSNEDEKIIKEYETVLRTNNENLNRSHELEVENNLKFSQIETLEKDIETLKGSLMAQGETLSKLKDAFVKTDNVQDEIEKEERVSVSRDTEKKYMEQEIKRAVDAIRENEEETHKLNEKQNGLESELKLKFEKSEISTKELNEKIGFLKKELKLENDLNEELVGQLSKTMDNLENLTIPRVRTQ----------------------------- |
6 | 6bpqA | 0.05 | 0.05 | 2.45 | 0.93 | EigenThreader | | SSEENVIAGGGGGLKRVIPESNYGGKIPGGGKETLKSINVAIKSKIPCESPHLIEIVSNAISFALYKAFSTNEHDRDNWNGQLKLLLEWNQLDLASDEIFTNDRNWESADLQDVMFTALVKDRLNLRKFLTNFSSLVFKNLQIAKNSYLTFVWKMVEDFRRGRHPLQALFIWSVLQSKVIWEQTLAALGASKLLKSMAKVKINAAGESEELANEYETRAVELFTECYSNDEDLAEQLLTELAVEAQFIAQPGVQNFLSKQWYGWKIILCLFFFPLIGCGFILFLYYVSFFFVVFSWNVIFYIAFLLLFAYVLLMEIILYVLVFILLCDEVRQWYMNGSKYFSVMDTLAIFYFIAGIVFGRVIFCLDYIVFTLRLIHIFTVSRNIIMLQRMMIDVFFFLFLFAVWMVAFGVARQGILRWEWIFRSVIYEPYLAMNNQPRIYMLSTNILLVNLLVAGGGGGGGGGGGGGGGGGGRNEDNEILAWEAV |
7 | 6yvuA | 0.11 | 0.07 | 2.70 | 1.07 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------DRREKAERTMSKKETKLQENRTLLTE---------EIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVEYYNIKHKHTSIRETLENGETRMKMNEFVKKTSEEIDSLNEDVEEIKLQKEKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQELSKQRDLYKRKEELVSTLADGGYNAQLAKAKTELNEV-SLAIKKSSMKMELLKKELLTEPKLKEATKDNELNVKHVKQCQETCDKLRARL---VEYGFDPSRIKDLKQREDKLKSHYYQTCKNSEYLKRRVTNLEFNYTKPYPNFELFQIDNDNIRYATALQT- |
8 | 6yvuB | 0.08 | 0.08 | 3.06 | 1.06 | SPARKS-K | | KLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRINGFHGRLGDLGVIDTVECAQHCIDYLRKNKLGYA--------------RFILLDRLRQFNLQPISTPENVPRLFDLV--------KPKNP------KFSNAFYSVLRDAYGKKRKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKRDHEPDLESQISKAEMEADSLASELTLEQQVKEAEMAYVKAVSQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQLESEIKDAETSCLSEDELRELDVELIESKINELSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNNAVQK |
9 | 5j1iA | 0.11 | 0.06 | 2.25 | 0.92 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------LQLEACETRTVHRLRLPLDKE-----------PARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAL----SPAAPTLRSELELTL--GKLEQVRSLSAIYLEKLKTISLVIRGTQ-----------GAEEVLRAHEEQLKEAQ-TLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGE-----RDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLR-----------YRESADPLGAWLQDARRRQEQIQA-QAVREQLRQEQALLEEIERHGEKVEECQRFAKQYIN--------------------AIKDYELQLVTY |
10 | 6yvuB | 0.08 | 0.04 | 1.61 | 0.67 | DEthreader | | ELVLNFKSYAGKQVVGPFHTSVIDE---IPGLIITRKASKYYINEKE----VTKLLKNGIDLDHKRF--KA-KESDGLEEGTANY--------------------------------------------------------------------------------------------------------------------------------------------------------------K---Q--LK-VDIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHEEILAKLKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSE--KEQ-E-------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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