>Q8N801 (248 residues) MDQPAVATASTSIREDLVGGESFITASKPAQKTSSFEREGWWRIALTDTPIPGTYHLKTF IEESLLNPVIATYNFKNEGRKKPPLVQRNNPVLNDLPQYMPPDFLDLLKKQVATYSFKDK PRPSPSTLVDKDQSLQLSPGQYNVLPAPVPKYASRSCVFRSTVQRFPTTYFIPHEGPGPG HYNVKMPPTSSVTSCFQSRVPRFLPSCSKTPGPGAYTTLRQFPKQSPTIAKMGQEHSLFF NNNNWLLK |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MDQPAVATASTSIREDLVGGESFITASKPAQKTSSFEREGWWRIALTDTPIPGTYHLKTFIEESLLNPVIATYNFKNEGRKKPPLVQRNNPVLNDLPQYMPPDFLDLLKKQVATYSFKDKPRPSPSTLVDKDQSLQLSPGQYNVLPAPVPKYASRSCVFRSTVQRFPTTYFIPHEGPGPGHYNVKMPPTSSVTSCFQSRVPRFLPSCSKTPGPGAYTTLRQFPKQSPTIAKMGQEHSLFFNNNNWLLK |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCC |
Confidence | 99884114788754456788752002576334676554213565423689998446764122213456667765455655566401035789999988898405777763345444677887778765545788899998737767877666545666236775677776677789999844568888876333301478766677789999998788766888873001145422211146330049 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MDQPAVATASTSIREDLVGGESFITASKPAQKTSSFEREGWWRIALTDTPIPGTYHLKTFIEESLLNPVIATYNFKNEGRKKPPLVQRNNPVLNDLPQYMPPDFLDLLKKQVATYSFKDKPRPSPSTLVDKDQSLQLSPGQYNVLPAPVPKYASRSCVFRSTVQRFPTTYFIPHEGPGPGHYNVKMPPTSSVTSCFQSRVPRFLPSCSKTPGPGAYTTLRQFPKQSPTIAKMGQEHSLFFNNNNWLLK |
Prediction | 86444152334424541445433233344445445353542135305731121304244215633445354343143534444414554654344233132652353156344323144453644443444275361121314334363543444432133424334444344663111141326456654332213232521456667311113142454345544231533442102133341218 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCC MDQPAVATASTSIREDLVGGESFITASKPAQKTSSFEREGWWRIALTDTPIPGTYHLKTFIEESLLNPVIATYNFKNEGRKKPPLVQRNNPVLNDLPQYMPPDFLDLLKKQVATYSFKDKPRPSPSTLVDKDQSLQLSPGQYNVLPAPVPKYASRSCVFRSTVQRFPTTYFIPHEGPGPGHYNVKMPPTSSVTSCFQSRVPRFLPSCSKTPGPGAYTTLRQFPKQSPTIAKMGQEHSLFFNNNNWLLK | |||||||||||||||||||
1 | 5wyjBE | 0.08 | 0.08 | 3.07 | 0.67 | CEthreader | FPDQITTAEPAIIALGTVTGEVIMFNMRKGKRIRTIKIPQSRISSLSFRTDGSSHLSVGTSSGDLIIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGKEYVFDPQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWSFSLRKDAQSQEMSQRSKFPEIVALAIENARIGEWENIITAHKDEKFARTWDMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRK | |||||||||||||
2 | 6a73A | 0.05 | 0.05 | 2.39 | 0.48 | EigenThreader | --ENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSALQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLERNIFEMLRIDEGLPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY---- | |||||||||||||
3 | 2xd8A3 | 0.08 | 0.07 | 2.85 | 0.53 | FFAS-3D | -DKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFITSSFHTPGTGNADKAPPVAEKTLLISSASATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGDVILGRMAMGADYLNPAAAV-------------------------- | |||||||||||||
4 | 7kznA | 0.07 | 0.07 | 2.84 | 1.29 | SPARKS-K | APCPRSGHSFTVLGERFGGCGRKDGKAAAFNDLYELDEYKWKELVVANAPPPRARHADKRLNKRIRYNDVWLFNYDDKSWTCMEVEGAAPEPRAHFTATRFGSYGGSGQVYNEMWVLHFGEQNITESIEGTGPAPRFDHSAFIYPVTPNSDTYDKLLIMGGRDLMYQDSHMLDLNK---MAWENETQPPTLPYEICNNVCDGIESVPYHKVGRKVMDCGSQMPPVDHGVAPVGREDTAWVFDVKTCSL | |||||||||||||
5 | 6um1A | 0.06 | 0.05 | 2.11 | 0.83 | DEthreader | TRKYYINV-CRPL------RYASACQMKYEV-S-LGVAKTGPMVED-GSL-----HLVCST-SLYTH--PIFSSFLWVRAGYTYSCAGLTGGRSTT-IFFYSWRTQYACPPYD-LTECSFKNE-A-GET-------QWSQGLTFTCPTAAA-AV--DQ---FVCRPLCEQTIHRTGGYILPCKVPVDGPPIDIGRSLITFHC-KRGVS-MGTP-KL-LR-T-S--VCDFV-F---EWET-DIFFHHTS | |||||||||||||
6 | 5wyjBE | 0.09 | 0.09 | 3.40 | 0.84 | MapAlign | VPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGDYLCASVSLQHLATYLNKLTVVTKSNVLLFNVRTGKLVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTIKIPQSRISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDNSLK | |||||||||||||
7 | 2atyA | 0.11 | 0.10 | 3.82 | 0.71 | MUSTER | KDKVDGTKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFNGNKSVMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNG---KEFNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPDFFPEDQPAENYKNTQPIMNTNESYFVYSKLNVQK | |||||||||||||
8 | 2nn6G1 | 0.21 | 0.05 | 1.67 | 0.49 | HHsearch | -----ARAARTVLGQVVLPGEELLLP-----------------E-QEDAEGPGGAVERDRLL-------VTKCG-----------------------------------------------------------------------------------RLRHKEP---------GSGSGGGVYWVD--------------------------------------------------------------- | |||||||||||||
9 | 5mc6j | 0.07 | 0.07 | 2.85 | 0.61 | CEthreader | QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADETLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI | |||||||||||||
10 | 6w5cA2 | 0.08 | 0.08 | 3.07 | 0.45 | EigenThreader | SYNGVKLLYCFEAIADDETSLYYFNMKYCKLLQSSIRNHYREEIFELLRDGKLSVLKLSSMFKVAKSLIGTYFGHLLKKAPPITDEDKQKADPEMFALRLALEEKRLNKVKSKKEVIANKIVAKALELRDKYGPSDTTKKGKKSSTNSFLMDWLARGVANKVKEMVMMHQGLEPNFTSHQDPFVHKNPENTFRARYSRCTPSELTDQLLFPSRGGMFYLATYKLDADATSVNWNGKQFWVCNADLVAA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |