Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSSCCCCCSSSSSSCCCCCCCCCCCCCCCCCCHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCSSCCCCCHHHHHHHHHHHHCCSSSSSCCCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCHCHHHHHHHHHHHHHHHHHHHC MPRGHKSKLRTCEKRQETNGQPQGLTGPQATAEKQEESHSSSSSSRACLGDCRRSSDASIPQESQGVSPTGSPDAVVSYSKSDVAANGQDEKSPSTSRDASVPQESQGASPTGSPDAGVSGSKYDVAANGQDEKSPSTSHDVSVPQESQGASPTGSPDAGVSGSKYDVAAEGEDEESVSASQKAIIFKRLSKDAVKKKACTLAQFLQKKFEKKESILKADMLKCVRREYKPYFPQILNRTSQHLVVAFGVELKEMDSSGESYTLVSKLGLPSEGILSGDNALPKSGLLMSLLVVIFMNGNCATEEEVWEFLGLLGIYDGILHSIYGDARKIITEDLVQDKYVVYRQVCNSDPPCYEFLWGPRAYAETTKMRVLRVLADSSNTSPGLYPHLYEDALIDEVERALRLRA |
1 | 2uv9D3 | 0.06 | 0.04 | 1.81 | 0.67 | DEthreader | | --R----QCIQINRSLLMGLIENEVKPVSGGAKVIVTTFSRQVTEY----------GIYARGQ------GPWGNRTFGCVEAINHLPYSGWVDDKVY--EALSSGIFY-VGNCIGSGVGVDDFGSYEATNAEPGEMSRPTSTTR-N----------GFMESQ-----KIGRSVPAPGQGVLTTAREKSG--S----IKYRRRQLE---------------LRRQQIKQWKEARRQEAEAQTSFGNEFW-------------------AL-----WG-----LTIDDLGV-AS--FH-GTSTNDKNESDVICQQLKHL----G-RTKGNA-VLGI-VLTGIVPGNRNAD-NVDKMVYPSRSIK---IKAF-SVTS---------FGFGQKGAQ------------LF- |
2 | 6wjhA | 0.43 | 0.24 | 6.99 | 3.95 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDFLVVVHQIRQLFQYQERPSQDILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
3 | 6wjhA | 0.43 | 0.24 | 6.91 | 1.66 | MapAlign | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDFLVVVHQIRQLFPSQDILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
4 | 6wjhA | 0.43 | 0.24 | 6.99 | 1.26 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDFLVVVHQIRQLFQYQERPSQDILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
5 | 2wa0A | 0.43 | 0.22 | 6.56 | 1.93 | MUSTER | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGVDLGTYFQSMDAESLFREALSNKVDELAHFLLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVD--SNTYTLVTCLGLSYDGLL--NQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVYGEPRKLLTQDWVQENYLEYRQV------RYEFLWGPRALAETSYVKVLEHVVRVNARVRIAYPSLREAALLE---------- |
6 | 6wjhA | 0.43 | 0.24 | 6.99 | 4.80 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDFLVVVHQIRQLFQYQERPSQDILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
7 | 6wjhA | 0.44 | 0.24 | 6.98 | 2.14 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HQIRQLFQYQERPSQDILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
8 | 6wjhA | 0.41 | 0.23 | 6.79 | 1.10 | EigenThreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------DDFLVVVHQIRQLFQYQERPSQD----------------ILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
9 | 6wjhA | 0.46 | 0.23 | 6.74 | 2.44 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSMPKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDPACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALRE---------- |
10 | 6wjhA | 0.40 | 0.20 | 5.87 | 0.67 | DEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYQE--RPSQD-ILHDKIIDLVHLLLRKYRVKGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLYDGIQCNEQ-SMPKSGLLIIVLGVIFMEGN-CI--PEEVMWEVLSYA---GREHGEPK-RLLTQNWVQEKYLVYRQV--PGTDCYEFLWGPRAHAETSKMKVLEYIANA-NGRPTSYPSLYEDA-LR--E------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|