Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAGHRPSNHFCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDVWRIPLGPLPHEFRGWIAPCRPRLGASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPVDIPHYTRLYSAGVAHSSAPATTLGLLRF |
1 | 1vt4I | 0.10 | 0.10 | 3.72 | 0.92 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 5yysA | 0.07 | 0.07 | 2.77 | 0.70 | EigenThreader | | YDQRRIMHRKVKPNPAMFVQNAVVRIPLCAENADLWIENSHIGPKWKIASRHIITGVPENDWSLAVPAGVCVDVVPMGDK---------GFVARPYGLDDVFKGDLRDSKTTLTGIPSAGANLKRLYAQRNWKALAVNHEKSLDMPELLALQMSRIHNRMLRARILKLDGKDYRPEEQAAFDLLRDGLLDTSSILASTVLGAINDFCGLAWEICQRTLVLEQLLTAEIVSSMFLNSSLHLNLLSEMKAHALD---MNEAIQRGSFVEFGRLVGKTWEQNKALDSGTNPPAVEAIIDLIKDYTLGPGAGGGGYLNAPNPRARFVEMTLS |
3 | 3l1pA | 0.56 | 0.25 | 7.20 | 1.38 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------DMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTISRFEALQLSLKNMSKLRPLLEKWVEEADNNENLQEISK---SVQARKRKRTSIENRVRWSLETMFLKSPKPSLQQITHIANQLGLEKDVVRVWFSNRRQKGKR------------------------------------------------------------- |
4 | 6hq6A | 0.07 | 0.05 | 2.16 | 0.67 | DEthreader | | DTGSKFYQRKSELS------YEI-SLLDGIQ-NIMPYQSNLVDAYKRSELHP----------G-FALSAIIVALKANIYLVSLQISPE--DD-IKG-------ANVNQ-----LFNIGINWEAAMYKFLEFIEKPGKLHF------ILATVLAKMSNFITLYYLRRFLK----------------IS-EMVKKRTHSMQGLKNFTKVSLQFIDHSIKNQRLYHEQLGLKNSLFREDQYSYLLYYEGIYWHMSKLLAVLCCA-KESEEV-IGRLLEHYYEINIKEDILSRFG----------ELGI--FV---KNGCLELNSLII---- |
5 | 3l1pA | 0.57 | 0.25 | 7.19 | 1.37 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------------DMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTISRFEALQLSLKNMSKLRPLLEKWVEEAENLQEISK------SVQARKRKRTSIENRVRWSLETMFLKSPKPSLQQITHIANQLGLEKDVVRVWFSNRRQKGKR------------------------------------------------------------- |
6 | 1vt4I3 | 0.10 | 0.10 | 3.72 | 1.39 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
7 | 3l1pA | 0.58 | 0.26 | 7.44 | 1.26 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------DMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTISRFEALQLSLKNMSKLRPLLEKWVEEADNENLQEISKS----VQARKRKRTSIENRVRWSLETMFLKSPKPSLQQITHIANQLGLEKDVVRVWFSNRRQKGKR------------------------------------------------------------- |
8 | 1p4rA | 0.08 | 0.08 | 3.11 | 1.29 | MapAlign | | -LTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGGRVKTLHPAVHVEEAVEQIDIGGVTLLRAAAKNHARVTVVCEPEDYVVVSTEMQSSESKDTSLETRR--------QLALKAFTHTAQYDEAISDYFRKQYSKGVSQMPLRYGNPHQTPAQLYTKLPITVLAPGFINLCDALNAWQLVKELKEAGAAVGIPLSEDEAKVCMVYDLYKTLTPISAAYARARGIAPGYEEEALTILSKKKNGNYCVLQMDIGIGAGQQSRIHCTRLAGDKANYWWLRHHPQVLSMKFKTGVKRAEISNAIDQYVTGTIGEDEDLIKWKALF |
9 | 3l1pA | 0.59 | 0.26 | 7.44 | 1.26 | MUSTER | | ---------------------------------------------------------------------------------------------------------------------DMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTISRFEALQLSLKNMSKLRPLLEKWVEEADNENLQEISK-----VQARKRKRTSIENRVRWSLETMFLKSPKPSLQQITHIANQLGLEKDVVRVWFSNRRQKGKR------------------------------------------------------------- |
10 | 3wj9A | 0.07 | 0.07 | 2.87 | 1.24 | MapAlign | | QFAYRSSKSIGLVNASENYASPPKFEAISEPARNACYSPNGKLFAYATATQVVINDLTQLPAANTYELGFSPLGKYLSTWERPGKEADGTPKQNK-------VWNTETGQLVFSFVQRNQTGWNLQYTCDESLAARLVTNEVHFEGISDFALSPGHAVAVFIPEKKGAPASVRTYSNSPLSQKTFFKADKVQFKWNALGTSLLVLTQDKSNKNYYGETQFDLDREGPIH-DVCWNADSKEFGIVYGYPAKTAIFDNRANVVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDAANNKKITTVEAANCTYCEFSPDSQFLLTAV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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