>Q8N7B1 (307 residues) MATAQLSHCITIHKASKETVFPSQITNEHESLKMVKKLFATSISCITYLRGLFPESSYGE RHLDDLSLKILREDKKCPGSLHIIRWIQGCFDALEKRYLRMAVLTLYTDPMGSEKVTEMY QFKFKYTKEGATMDFDSHSSSTSFESGTNNEDIKKASVLLIRKLYILMQDLEPLPNNVVL TMKLHYYNAVTPHDYQPLGFKEGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKVMTEATK VIDLENNLFRENSTTEIAHQGLDCDEEEECNDHIQRMNFVCSQQSSECSRKKRKVSEPVK VFIPNRK |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MATAQLSHCITIHKASKETVFPSQITNEHESLKMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLHIIRWIQGCFDALEKRYLRMAVLTLYTDPMGSEKVTEMYQFKFKYTKEGATMDFDSHSSSTSFESGTNNEDIKKASVLLIRKLYILMQDLEPLPNNVVLTMKLHYYNAVTPHDYQPLGFKEGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKVMTEATKVIDLENNLFRENSTTEIAHQGLDCDEEEECNDHIQRMNFVCSQQSSECSRKKRKVSEPVKVFIPNRK |
Prediction | CCCCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCSSSCCCSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHCCCSSSSSSSSCCCCCCCSSSSSSSSSSSSCCCCCSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSSSSSSSSCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 9875434553011001333130320689999999999999999999997268997761100215824589852888789999999999999999959630899999918999961589999998855887235521366666655678999999999999999999981177899872799999992699996568998646888752003787158998678579608999999714667776542001566654433345665312355544204752257765455321356886444589999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MATAQLSHCITIHKASKETVFPSQITNEHESLKMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLHIIRWIQGCFDALEKRYLRMAVLTLYTDPMGSEKVTEMYQFKFKYTKEGATMDFDSHSSSTSFESGTNNEDIKKASVLLIRKLYILMQDLEPLPNNVVLTMKLHYYNAVTPHDYQPLGFKEGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKVMTEATKVIDLENNLFRENSTTEIAHQGLDCDEEEECNDHIQRMNFVCSQQSSECSRKKRKVSEPVKVFIPNRK |
Prediction | 6444444444544534454335643344720140023002000000011140034720453425703021134364463043014005001400454103100000013674343110212030414774241315455564546654446402510241043013005304402661201020101356116613042034055552231574134140220304202010202134441453654434564555345543545646535552564533445555435576563654354346768 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCSSSCCCSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHCCCSSSSSSSSCCCCCCCSSSSSSSSSSSSCCCCCSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSSSSSSSSCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MATAQLSHCITIHKASKETVFPSQITNEHESLKMVKKLFATSISCITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLHIIRWIQGCFDALEKRYLRMAVLTLYTDPMGSEKVTEMYQFKFKYTKEGATMDFDSHSSSTSFESGTNNEDIKKASVLLIRKLYILMQDLEPLPNNVVLTMKLHYYNAVTPHDYQPLGFKEGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKVMTEATKVIDLENNLFRENSTTEIAHQGLDCDEEEECNDHIQRMNFVCSQQSSECSRKKRKVSEPVKVFIPNRK | |||||||||||||||||||
1 | 4tzlA | 0.18 | 0.13 | 4.14 | 1.00 | DEthreader | ------------DDKTWSKLFPSIVSDPDRSSNFMIRAIYVVFSAVLRQRNILEKEYFSKNYITELSCMTLSFKNL-R-AHQIAQLLRAAGDATKDGFLKEISLVVTEHD-GDVEAIEVFSMKFIYFENGGVVAPHFA-ELAQLRYEGA-ESVRDQMVTIVRSVQFLCTVLEPLPAEFTANFRLKYTN-DAPSNFRIDGFDDSSTF--YTLPDGIQSVTIGHLRPGHHAAHMQCWSKSM-------------------------------------------------------------------- | |||||||||||||
2 | 4trkA | 0.19 | 0.14 | 4.64 | 2.76 | SPARKS-K | --------------SQWKATFPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQ--SSVPAAKRVSSTFDGLRDAIQQGYLREFAIVFYKK-PNEEDINEVFAFRFAYGDGEIFVSLNNGIDTNESAKFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSYTEK-APKDYTPEGYLLSPMF--YTLNQDIRKASIGIVCGGHHKIQMLAASQY--LKQDFPNMSPYGLSQGI-------------------------------------------------- | |||||||||||||
3 | 4tzlA | 0.18 | 0.13 | 4.14 | 1.92 | MapAlign | ----------------WSKLFPSIVSDPDRSSNFMIRAIYVVFSAVLRQRNILEKEYFSKNYITELSCMTLSFK--NLRAHQIAQLLRAAGDATKDGFLKEISLVVTEHDG-DVEAIEVFSMKFIYFENGGVARLEDPHFAELAQLRYGAESVRDQMVTIVRSVQFLCTVLEPLPAEFTANFRLKYT-NDAPSNFRIDGFDDS--STFYTLPDGIQSVTIGHLRPGHHAAHMQCWSKSM-------------------------------------------------------------------- | |||||||||||||
4 | 4tzlA | 0.18 | 0.13 | 4.25 | 1.59 | CEthreader | ---------DAIDDKTWSKLFPSIVSDPDRSSNFMIRAIYVVFSAVLRQRNILEKEYFSKNYITELSCMTLSF--KNLRAHQIAQLLRAAGDATKDGFLKEISLVVTEHD-GDVEAIEVFSMKFIYFENGGVVARLEDPHFLAQLRYEGAESVRDQMVTIVRSVQFLCTKLEPLPAEFTANFRLKYT-NDAPSNFRIDGFDDSSTF--YTLPDGIQSVTIGHLRPGHHAAHMQCWSKSM-------------------------------------------------------------------- | |||||||||||||
5 | 4trkA | 0.20 | 0.15 | 4.90 | 1.91 | MUSTER | --------------SQWKATFPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQ--SSVPAAKRVSSTFDGLRDAIQQGYLREFAIVFY-KKPNEEDINEVFAFRFAYGDEGIFVSLNNGIDTLLQAKFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSYT-EKAPKDYTPEGYLLSPM--FYTLNQDIRKASIGIVCGGHHKIQMLAASQY--LKQDFPNMSPYGLSQGI-------------------------------------------------- | |||||||||||||
6 | 4trkA | 0.20 | 0.16 | 4.99 | 6.01 | HHsearch | --------------SQWKATFPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQS--SVPAAKRVSSTFDGLRDAIQQGYLREFAIVFYKKPN-EEDINEVFAFRFAYGDEGIFVSLNNGIDTNLQAKFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSYT-EKAPKDYTPEGYLLSPM--FYTLNQDIRKASIGIVCGGHHKIQMLAASQ--YLKQDFPNMSPYGLSQGI-------------------------------------------------- | |||||||||||||
7 | 4trkA | 0.20 | 0.16 | 4.99 | 2.43 | FFAS-3D | --------------SQWKATFPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQ--SSVPAAKRVSSTFDGLRDAIQQGYLREFAIVFY-KKPNEEDINEVFAFRFAYGDEGEIFVSLNNGIDTNEAKFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRV-SYTEKAPKDYTPEGYLLSPMFYTL--NQDIRKASIGIVCGGHHKIQMLAASQ--YLKQDFPNMSPYGLSQGI-------------------------------------------------- | |||||||||||||
8 | 4trkA | 0.20 | 0.15 | 4.79 | 1.42 | EigenThreader | ---------SQWKAT-----FPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQ--SSVPAAKRVSSTFDGLRDAIQQGYLREFAIVFYK-KPNEEDINEVFAFRFAYGDEGEI-----FVSLNNGIKFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSY-TEKAPKDYTPEGYSPMFYTLN----QDIRKASIGIVCGGHHKIQMLAASQYLKQ-----DFPNMSPYGLSQGI----------------------------------------------- | |||||||||||||
9 | 4tzjA | 0.21 | 0.15 | 4.65 | 2.32 | CNFpred | -----------------KATFPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQS--SVPAAKRVSSTFDGLRDAIQQGYLREFAIVFYKKP-NEEDINEVFAFRFAYGDEEIFVSLNNGIDTNES-KFVDTDNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSYTE-KAPKDYTPEGYLLSP--MFYTLNQDIRKASIGIVCGGHHKIQMLAASQY--------------------------------------------------------------------- | |||||||||||||
10 | 4trkA | 0.20 | 0.14 | 4.48 | 1.00 | DEthreader | --------------SQWKATFPVDLEIEKNSEMFALRYIKCASAFILDRRGILDEKCFKTRTIDKLLVTAFQS-SVPA-AKRVSSTFDGLRDAIQQGYLREFAIVFY-KKPNEEDINEVFAFRFAYGDE-----DESSQELLQAKFVDT-DNTKQMFASTIKKLHRCIKKMEPLPQGSDASFRVSYTE-KAPKDYTPEGYLLSPMF--YTLNQDIRKASIGIVCGGHHKIQMLAASQYL------------------PY------------------------------------------------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |