Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700
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| SS Seq | CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC MSARATRPRSRRGRHAPPGELDPVAESSEEVEAASGSSKPSFAPPPVSSGLEQLGPMEEVSGQGLGSRTDKKMDGGSGRELASAPEVPHKPAVEAHQAPEAALQYKETVPPGNGAPDVFQTLQHTLSSLEAAAAAWRHQPPSHSGPMEFEGTSEGGAGSLGKQEGAGSCQREAARLAERNAWLRLALSSREDELVRTQASLEAIRAEKETLQKEVQELQDSLLRLEPCPHLSHNQAGGSGSGSSSSEADREPWETQDSFSLAHPLLRRLRSHSSTQILGSLPNQPLSPEMHIMEAQMEQLRGSIEKLKCFNRLLSAVLQGYKGRCEGLSMQLGQREAEATALHLALQYSEHCEEAYRVLLALREADSGAGDEAPMSDLQAAEKEAWRLLAQEEAAMDAGAQQNPQPSPEGSSVDKPTPQEVAFQLRSYVQRLQERRSLMKILSEPGPTLAPMPTVPRAEAMVQAILGTQAGPALPRLEKTQIQQDLVAAREALADLMLRLQLVRREKRGLELREAALRALGPAHVLLLEQLRWERAELQAGGANSSGGHSSGGGSSGDEEEWYQGLPAVPGGTSGIDGGQVGRAWDPEKLAQELAASLTRTLDLQEQLQSLRRELEQVAQKGRARRSQSAELNRDLCKAHSALVLAFRGAHRKQEEQRRKLEQQMALMEAQQAEEVAVLEATARALGKPRPPLPPPQLGDTFL |
1 | 5o09C | 0.08 | 0.08 | 3.23 | 1.22 | EigenThreader | | ESDKVATIKNNLAMIFKQLRKFERAEGYYCEALETFQRLDGEQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAAGDAAMNGDTALERQIASASRSVEEARRLAYHDPIRGDFRKAESLYREALFRAQELRKQDPDLLTGIYSLLAHLYDRWGDKAAEFYELALKISAENKVATIKNNLAMIFKQLERAEGYYCEALETFQRLDGEQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAALERQIASASRSVEEARRLAYHDPIRVGALVEQISVLADLRQKEAHLYDRWGDKAAEFYELALKISAENGLEESDKVATIKNNLAMIFKQLRAEGYYCEALETFQRLDGEQSARVASVYNNLGVLYYSHDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAAGDFQKAEACVDRAKRIRAAMQIASASRSVEEARRLAYHDGALVEQISVLADLRQKERKAESLYREALFRAQELRKQDPDLLTGIYSLLAHLYDRWGRFYELALKISAENGLEESDKVATIKNNLAMIFKQLERAEGYYCEALETFQRLDRVASVYNNLGVLYYSHDRAQVMHERALAIRQNLADLSQTFINLGAVYKAAGDFQKAEACVDRAKRIRAAMNGDTALERQIASASRS |
2 | 7kogB | 0.16 | 0.10 | 3.38 | 1.66 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------EELEEAKRKLQARLAE--------------------------AEETIESLNQKVIALEKTKQRLATEVEDLQLEVDRATAIANAAEKKAKAIDKIIGEWKLKVDDLAA--------------------------ELDASQKECRNYSTELFR--------------LKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEEAEAALEQEENKVLRSQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALD------------SMQASLEAEAKGKAEALRMKKKLEADINELE---------------IALDHANKANSEAQKTIKKYQQQLKDVQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELGDAHEQINELAAQATSASAAKRKLEGELQT-----------------LHADLDELLNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALETQIKELQIRLLKGGKKAIAKLEQRVRELENELDGEQRRHQKNLRKSERRIKELS---------------- |
3 | 6yvuB | 0.09 | 0.09 | 3.36 | 1.13 | SPARKS-K | | IDLDHKRFLILQGEVENIAQMKPKAEKESDLEDIIGTAN---------YKPLIEERMGQIENNEVCLEKENRFEIVDREKNLEKEKQLTLLRSKLFQFLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISIIRHEKELEPWDLQLQEKESQIQLAESELSLQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRGRINGDDSFDVAISTAAQHCIDYLRKNKLGYARFILLDRLRQFNLQPISTPENVPRLFDLVKFSNAFYSVLRDTLNNVAYGKKRFRVVTVD---GKLIDISGNHVAKGLELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNYNDLQSETKTKKEKIKGLQDEIM--KIIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEM |
4 | 4iggA | 0.13 | 0.08 | 2.69 | 1.22 | CNFpred | | --------------------------------------------------------------------------------------------------------------------KLLVQLKVVEDGILKLRNAG----------------------------NEQDLGIQYKALKPEVDKLNIMAAKRQQELK-DVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKA------------------------NRDLIYKQLQQAV--TGISNAAQATASDD--ASQHQGGGGGELAYALNNFDKQIIVDPLSEERFRPSLEERLESIISGAALMADRERIVAECNAVRQALQDLLSEYMG--NAGRKERSDALNSAIDKMTK------------------------------KTRDLRRQLRKAVMDHVSDSFL----------ETNVPLLVLIEAAKNGNEKE----KEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAK---------------------------------------------------PQSKLAQENMDLFK--EQWEKQVRVLTDAVDDIT----SIDDFLAVSENHILEDVNKCVIALQEK------DVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVY------------ |
5 | 2ipcA | 0.07 | 0.07 | 2.93 | 1.53 | MapAlign | | QLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVNDYLARRDAEWMGPVYRGLGLSVGVIQHYLADVTYVTNSELGFDYLRDNMAISPDQLVLRHDHPLHYAIIDEVDSIKATDLYYKMAEIAKKLERGLPAEPGVRKEPTGDYTVEEKNRSVHLTLQGIAKAEKLLFSPENMELAHMLIQAIRAKEIIVDETGRLMPGRRYGEGLHQAIEAKTEEKEFQEIYGMDVVVVPTNRPVIRKDFPDVVYRTEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQMLKEPRLYLPRLEMRLELFKKASQKQQGPEWERLRKPPGNLRTAWEGLKRAVHTLAVLRREAEIVAQAGRSKTVTIAGTDIKLGGNPEYKVELFIKKMVAKEEEARALAQELGIREELLERIREIREECKQDEERVDNQLRGGSRFYVSFDDDLMRLFASDRVIAMLDRMGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILKDEEVKEAAIGMVEETVASLAENFLNPEVHPEDWDLEGLKATLLDTAPQLQDFPFAELRALKAEEAVERLVEAALKAYEAREAELSPPLMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEATRLFNEMVAFIKSEVAKFLF---------------------- |
6 | 3a6pA | 0.06 | 0.06 | 2.71 | 1.17 | EigenThreader | | PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDELVMFILLRLAEDVVTFQTLPMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSKPLMVLFGDVAMHYILSAAQTYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFSFVQWEAMTLFLESVITQMFRTLNREEIPLQMVLNFLILSCVLTNVSALFPFVTYEFLPQVFSKLFSSVTFETVEESKANVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLISNQFK----------NYERQKVFLEELMAPVASIWLQKDPGLEDPCGLNRARMSFCVYSILGVVKRTKLLDNLLALIRTHNTLLERMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDFVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQMLTREVMDLITVCCVDVCTALLITAFNSLLSCQRTTSQLCWPLLKVTWLFTSVLKGLQMHGCMASLVHLAFQIYEALRPRYLEIRAVMEQIPE |
7 | 6z9lA | 0.11 | 0.08 | 2.76 | 1.66 | FFAS-3D | | --------------------------------------------------------------------------------------------DTAKKEKDAID-------------QSVKDQQAVVDQNKDALDQSQQAVTDQQAVVDEAKKVVDEATPSAIEKAKEQVATDTQAVDEQQKVVQTDVNQQQAVVDEKAKETNAAKVQNEKDQQAVTAAKQEQAK-------------------------------------LEELAKNAEAEKV----------KAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKLDNSKEELKGHKGAEEIATLEKTALEMSKEDEKNKDVMW------------DIQHLSADQKKELSVYTTELLNDRKKLGLSQSSQYQNGEVASMKSKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKS------------------------------------------LQQTKDQLATINELIQNRAAAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLA-KENLNQKQVALKTSTRSLSRLYEKALNELNKAEAAVVQAQE--------------- |
8 | 6r9tA | 0.12 | 0.11 | 3.99 | 1.10 | SPARKS-K | | LDKASSLIEEAKKAAGHPGDPESQQRLAQVAKAVTQALNRCVSCLPGQRDLRAVGDASKRLLSDSLPPSTGTFQEASRGTPQDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLLAAKALSTDPAAPTMCTQQAPGLENPVQPINDMS-YFGCLDSVMENSKVLGEAMTGISQNAKNLPEFGDAISTASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQFASLGEPGCTQAQVLSATSALCNSCRLASA--------RTTNPTAKRQFVQSAKEVANSTANLVKTIKALEENRAQCRAATAPLLEAVDNLSAFASNPEFSEPIVISAKTMLESAGGLIQTARAVNPRDSWSVLAGHSRTVSDSIKKLITSMRDKAPG------------QLECETAIAALNSCLRDLDQASLAAVSQQLAPREGISQEAHTQMLTAVQEISHLRAEASQLGHKVSQMAQYFEPLTLAAVGAASQMALLDQTKTLAESALQLLYTAKEAMTEAVEDLTTTLNEAASAA-------GVVGGMVDSITQAINQLDEGPMGEPEGSFVDYQTTMTAKAIAVTVQEMVTKSNELGPLANQLTSDYGRLASEAEEIGSHIKHRVQELGHGCAALVTKAGALQCSDAYTKKELIECARRVSEKVSHVLAALQAAASAVSGTLNREGTETFADHRE |
9 | 1hciA | 0.14 | 0.08 | 2.85 | 1.19 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------KPPKVQEKCQLEINFNTLQTKLRISNRPAFMP--SEGKMVS--------DIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQK--------------------------DYESASLT-EVRALLRKHE---------------------AFESDLAAHQDRVEQIAAIAQELNELD---YHDAVNVNDRCQKICDQWDRLGTLTKRREALERMEKLLETIDQLH------------LEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQS----LITAHEQFKATLPEADGERQSIMAI------------QNEVEKVIQSYNIRISSSN-------YSTVTMDELRTKWDKVK---QLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWI-------------------------------------------------QNKMEEIARSSIALEDQMNQLKQYEHNIINYK-----------NNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQILTRD---------------- |
10 | 6ymwA | 0.09 | 0.08 | 3.02 | 1.42 | MapAlign | | ---------------------------------------------------FFEIYNSLPTLEEKKAFESALNIFNQDRQKVLENRATEAARERWKHDFEEAKARGDISIEKNLNVKWKWYNEMLPLVKEEINHCRSLLSEKLSDKKGLNKVDTNRLGYGPYLTLIDPGKMCVITILELLRTARAVISVGKAIEMEFRSEQVLKSESPQSIRARIGSVLISMLIQVAKVSVQGVDPVTKAKVHGEAPAFAHGYQYHNGSKLGVKTLIRQLSGGYHYTQSTLLRTKDSPEQVAYLKAASFDVVSQVWNKQDEMVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDRSNRCDTNYKGLKWLKIHLSNLF----GFDKLPLKDRVAFTESHLQDIKDSAENPLTGDRWWT-------TADKPWQALATCFELNEVMISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAVVKQTVMTNVGATFQIAKQLLDFSKYLTKHVFSAHLIQDWLGESAKRISFMSSVIWTTPLGLPIVQPYREESKKQVETNLQTVFISDPFAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQYWTHSDIDTMNVVLREQFIKLHLVLRLKEEFDQRKIIRIRRSTTLADEIYFEKQELLDITDLDALELENGNSGMSVLLPLRLPEIP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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