Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCSSCCCHHHHCCCCCCCCCCHHHSSSSSSSCCCCCCCCSSSSSCCCCCCCCCCSSSSSSSSSSCCHHHHHHHCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCCCCSSSSSCCCCCCSSSSSCHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHCCSSSSSCCHHHHHHHHHHHHHCCSC MLRLVPTGARAIVDMSYARHFLDFQGSAIPQAMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPHSVNSKL |
1 | 3krtA | 0.19 | 0.17 | 5.46 | 1.17 | DEthreader | | ---------------SPDSTPADIAALPLPESYRAITVHETFKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSGFLPYHVIGSDLAGVVLRTGPGVN-AWQAGDEVVACWGGGLAEIALVKSNQLMPKPDHLSWEEAAAP-GLVNSTAYRQLSNGAGMK--IAGLGSYATQFALA--GGA |
2 | 2c0cA1 | 0.89 | 0.77 | 21.64 | 2.26 | SPARKS-K | | ------------------GVDLGTENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPS-VEVDLGD-LSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH------ |
3 | 5a3jA | 0.19 | 0.16 | 5.12 | 0.58 | MapAlign | | ------------------------------KLMHALQYNSYG-GGAAGLEHV-QVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPFPCIPATDVAGEVVEVGSGVK-NFKAGDKVVAVLGGGLAEFAVATEKLTVKRPQEVGAAEAA-ALPVAGLTALQALTNPAGLKLASGGVGHYAVQLAKLANAHV |
4 | 5a3jA | 0.19 | 0.16 | 5.12 | 0.38 | CEthreader | | ------------------------------KLMHALQYNSYGGGAAG--LEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPFPCIPATDVAGEVVEVGSGVK-NFKAGDKVVAVLGGGLAEFAVATEKLTVKRPQEVGAAEAA-ALPVAGLTALQALTNPAGLKLASGGVGHYAVQLAKLANAHV |
5 | 2c0cA1 | 0.88 | 0.76 | 21.36 | 2.00 | MUSTER | | ------------------GVDLGTENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPS-VEVDLGDLS-PEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH------ |
6 | 5k1sA | 0.20 | 0.17 | 5.58 | 1.05 | HHsearch | | ------------------HHHHHAENLYFQGHMKAVVLRSFGEA--GNLKM-ETMPMPRPGRGEVLLRVHACGVCYHDVINRRGNLP-RTSVPAILGHEAAGEVIEVGPDTP-GWKTGDRAATLLPGGYAQFMVAPVGGLGRVPASLPWNEAATV-CCTTGTAVHTVRTRGKVRAGSGGVGLSSVQLARLDGARV |
7 | 5gxeA1 | 0.15 | 0.12 | 4.15 | 2.12 | FFAS-3D | | --------------------------------FNALVVDKDEESGK-TQAAVKQLSLTDLPVGEVTVAVEYSTVNYKDGLCIGPGGGLVRKYPHVPGIDFAGTVENSSDERYKPGDKGWRVGEAHWGGYSQKANVRADWLVPLPEGLDTRQAMAV-GTAGFTAMLAVMALDSVMQPYANRLRAWERIARDLPMDK |
8 | 4gi2A | 0.15 | 0.14 | 4.68 | 0.83 | EigenThreader | | PAWTGQTAEAKD-----LYELGEIPPLGHVPAKMYAWAIRRHGPPEQSHQLEVLPVWEIGD-DEVLVYVMAAGVNYNGVWAGLGEPIVHKGEYHIAGSDASGIVWKVG-AKVKRWKVGDEVIVHCDGSFAQFCRVQSRQLMARPKHLTWEEAA-CYTLTLATAYRMLFGHAPHTVRGLGVFGVQLCAA---SGAN |
9 | 2x7hA | 0.75 | 0.63 | 17.87 | 2.64 | CNFpred | | ----------------------------IPQAMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLL-VSGTTAYISLKELGGLS-AAGGTGQFAMQLSKKAKCHV |
10 | 4a0sA | 0.18 | 0.16 | 5.17 | 1.17 | DEthreader | | ---------------DG-ASAAEIEAAPVPDTYLALHLRDAFKDVRKSLRLGEVP-MPELAPDEVLVAVMASSINYNTVWSAMFEPIPHFLPYHVLGSDCSGVVVRTGIGVRR-WKPGDHVIVPWGGGLAEYGVVRASQLLPKPAHLTWEEAAVS-PLCAGTAYRMLVGAQMK---IAGLGSYAIQFVK-N-GGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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