Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSSSCCCCCSSSSSSSCCCCCCCCCCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSSCCCCHHHHHCCCCSSSSSCCCCSSSSCCCCCCCCCCCCCCCCSSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHCCCSSSSSCCCCCCCCCSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSSSSSSSSCCSSSSCCCCCCCCSSSSCCCCCSSSCCCSSSSCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC MASQFCLPESPCLSPLKPLKPHFGDIQEGIYVAIQRSDKRIHLAVVTEINRENYWVTVEWVEKAVKKGKKIDLETILLLNPALDSAEHPMPPPPLSPLALAPSSAIRDQRTATKWVAMIPQKNQTASGDSLDVRVPSKPCLMKQKKSPCLWEIQKLQEQREKRRRLQQEIRARRALDVNTRNPNYEIMHMIEEYRRHLDSSKISVLEPPQEHRICVCVRKRPLNQRETTLKDLDIITVPSDNVVMVHESKQKVDLTRYLQNQTFCFDHAFDDKASNELVYQFTAQPLVESIFRKGMATCFAYGQTGSGKTYTMGGDFSGTAQDCSKGIYALVAQDVFLLLRNSTYEKLDLKVYGTFFEIYGGKVYDLLNWKKKLQVLEDGNQQIQVVGLQEKEVCCVEEVLNLVEIGNSCRTSRQTPVNAHSSRSHAVFQIILKSGRIMHGKFSLVDLAGNERGADTTKASRKRQLEGAEINKSLLALKECILALGQNKPHTPFRASKLTLVLRDSFIGQNSSTCMIATISPGMTSCENTLNTLRYANRVKKLNVDVRPYHR |
1 | 5mioC | 0.66 | 0.41 | 11.67 | 1.00 | DEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--EFRATLE-CHPLTMTDPIEEHRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVD--KYLENQAFCFDFAFDETASNEVVYRFTAAPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDS--------KGIYAMASADVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVK-EL-------- |
2 | 4ozqA | 0.24 | 0.22 | 6.76 | 1.34 | MapAlign | | -------------------LLPNPPKTWEEIPLDLKAKGKSALFTWPLIAA--DGGYAFKYENGKYDDVGVGALVDLIKNKHMNYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLEYLLEGLEAVPRIAATMENAQKIMPNIPQMSAFWYAVRTAVINALAAAQTNAAAENSQVTVAVRVRPFSKREKTEKASQVVFTN-GEEITVEHP-------DMKQVYSFIYDVSFWFYASQTTVYETLAAPLLDRAFEGYNTCLFAYGQTGSGKSYTMMGL------NEEPGIIPRFCEDLFAQIAKKQTSEVSYHLEMSFFEVYNEKIHDLLVK-QPLRAREHPVSGPYVEGLSMNVVSSYSDIQSWLELGNKQRATA------KSSRSHSVFTLVMTQTKTITSRINLVDLAGSERC----STAGQRLKEGVSINKSLLTLGKVISALSGKRVFIPYRESTLTWLLKESLG-GNSKTAMIATVSPAASNIEETLSTLRYATQAR----------- |
3 | 5mioC1 | 0.66 | 0.43 | 12.14 | 3.59 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPNWEFARMIKEFRATLECHPLTMTDPIEEHRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTAAPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDSK--------GIYAMASADVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKEL--------- |
4 | 4ozqA | 0.18 | 0.16 | 5.29 | 1.35 | EigenThreader | | GIKVTVEHPDKGLLAEITPDKAFQDKLYPFRYN------GKLIAYPIAVEAL--SLIYNKDLLPNPPKTALMPYFTWPLIAADYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDPTFKGQPSKPLKSYEEELAKDPRIAATMENAQKGMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAA-------------AENSQVTVAVRVRPFSKREKTEKASQVVFTNG--EEITVEPDMK---------QVYSFIYDFWSFYASQTTVYETLAAPLLDRAFEGYNTCLFAYGQTGSGKSYTMMGE----------EIIPRFCEDLFAQIAKKQTSEVSYHLEMSFFEVYNEKIHDLLVKQPLRAREHP--VSGPYVLSMNVVSSYSDIQSWLELGNKQ---RATAK----SSRSHSVFTLVMTQTHRITSRINLVDLAGSERCSTAGQRLKEGVSINKSLLTLGKVISALSEQANGKRVFIPYRESTLTWLL-KESLGGNSKTAMIATVSPAASNIEETLSTLRYATQAR----------- |
5 | 3hqdA | 0.36 | 0.22 | 6.41 | 1.37 | MapAlign | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNIQVVVRCRPFNLAERKASAHSIVECDPRKEVSVRTGGLAD----KSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSTWEEDPLAGIIPRTLHQIFEKLT--DN-GTEFSVKVSLLEIYNEELFDLLNPSERLQMFDDNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKEVKIGKLNLVDLAGSENIGRSG-AVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSL-GGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPE---- |
6 | 4ozqA | 0.26 | 0.24 | 7.53 | 2.24 | HHsearch | | AATDGPDIIFGGQSLAEITPAFQDKLYPFT-WDAVRYNGKLIAYPIAV-E-----ALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQNAHMNADTDIAAGETAGPWAVTVLPTFKGQPSKPF-V---GVLSAGINAASPLAKEFLELEEELAKDPRIAATMENAQKGEIMPNIPQMAFWYAVRTAVINAASGRQTVNAAAENSQVTVAVRVRPFSKREKTEKASQVVFTNG-EEITVEHPDMKQVYSFIYDVSFWSFDECHPGYASQTTVYETLAAPLLDRAFEGYNTCLFAYGQTGSGKSYTMMGLNE------EPGIIPRFCEDLFAQIAKKQTSEVSYHLEMSFFEVYNEKIHDLLVK-QPLRAREHPVSGPYVEGLSMNVVSSYSDIQSWLELGNKQRA------TAKSSRSHSVFTLVMTQTHRITSRINLVDLAGSERCS----TAGQRLKEGVSINKSLLTLGKVISALSEKRVFIPYRESTLTWLLKES-LGGNSKTAMIATVSPAASNIEETLSTLRYATQAR----------- |
7 | 3hqdA | 0.36 | 0.21 | 6.37 | 0.59 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTG---GLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEDPLAGIIPRTLHQIFEKLTDN---GTEFSVKVSLLEIYNEELFDLLNPSERLQMFDDPRRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKEVKIGKLNLVDLAGSENIGRS-GAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSL-GGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVN-- |
8 | 6bbnE | 0.76 | 0.52 | 14.67 | 2.40 | MUSTER | | --------------------------------------------------------------------------------------------------------------------------------------------------SNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPL----PIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGD--------SKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCRTS------AHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKE---------- |
9 | 6bbnE | 0.76 | 0.52 | 14.67 | 2.59 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------SNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPL----PIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGD--------SKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCRTS------AHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKE---------- |
10 | 6bbnE | 0.72 | 0.50 | 14.09 | 3.72 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------SNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPL----PIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDSKG------IYALAARDVFLMLKKPNYK--KLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCR------TSAHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKE---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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