Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC CCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLALTQICSDPDTSSPSDDQLSLTALCGYH |
1 | 5cwnA | 0.12 | 0.11 | 3.90 | 0.72 | CEthreader | | ERGDEEEFRKAAEKALELAKRLVEQAKKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAAESALEVAKR-LVEVASKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAAESA-LEVAKRLVEVASKEGD--PELVEEAAKVAEEVRKLAKKQG-DEEVYEKARETAREVKEELKRVREEKGGWLEHH--------- |
2 | 6yleC | 0.09 | 0.08 | 3.05 | 0.62 | EigenThreader | | -EFIA---------VSTLARNLEI-----AKGNEFHTILATLSFLVTKILKLIRSGNDFDLWKGCHTSVV-----TCAYNLVLSTHGGQLLAAIYSRLEQKTGFTLISSVAIIIDLMKTQRLVCENFAYLHLLD--SNWRTGLMSILSQIIQLCGEILDIPQRLSLLADMLVAFISLPTPFPIRVPLGGINSLCEVLLGV |
3 | 1y7911 | 0.16 | 0.12 | 3.83 | 0.81 | FFAS-3D | | ------------------NPFLVQSHFDQIANHHYRPAFDEGMQQKRAEIAALNPQMPDFNNTILALEQ-SGELLTRVTSVFFAMTAAHTNDELQRLDEQ--FSAELAELANDIYLNGELFAR--VDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKL-AQADKAKL------------------------------- |
4 | 5cwcA | 0.14 | 0.12 | 4.09 | 0.68 | SPARKS-K | | --SEKEELRERLVKICVENAKRKGD-----DTEEAREAAREAFELVREAAERAGIDSSAIRLIKECVENAQGYDI----SEACRAAAEAFKRVAEAAKRAGITSSEVLELAIRLGYDISEACRAAAEAFKRVAESSETLKRAIEEIRKRVEEAQREGNDI------SEACRQAAEEFRKKAEELKRR------------- |
5 | 6xteA | 0.09 | 0.08 | 3.04 | 0.63 | CNFpred | | KFYFHDGVRVAAAESMPLLLECARVRGPEYLTQMWHFMCDALIKAIGEPDSDVLS--EIMHSFAKCIEVMGCLNNEHFEELGGILKLEEHFKNQELRQVKDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLIMPHRPWPDRQWGLCIFDDVIEHCS---------------------- |
6 | 6r9tA | 0.06 | 0.04 | 2.02 | 0.83 | DEthreader | | ACIAASAVSGIIADLDTTIMFATAGTLNREGET--H---------------SS-A-TITRLADVVKLGAASLGDPETQVVLINAVKDVAK-ALGDLIATLKA---VTNVTSLLKEATTEHIRQELAVFCSPE-PP------STPEDFIRMTKG-------TNLSRRAIAMLYGRECANG-ERVGSVTELIQEVIPANALD |
7 | 5cwnA | 0.10 | 0.10 | 3.48 | 0.87 | MapAlign | | -MDPEEILERAKESLERAREASGDEEEFRKAAEKALELAKRLVEQ--AKKEGDPELVLEAAKVALRVAELAAKNDKEVFKKAAESALEVAKRLVEVASKDPELVLEAAKVALRVKKAAESALEVAKRLVEVASKEPELVEEAAKVAEEVRKLAKKQGDVYEKARETAREVKEELKRV------REEKGGWLEH------- |
8 | 5cwmA | 0.14 | 0.14 | 4.59 | 0.48 | MUSTER | | ---DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEDPEVALRAVELVVRVA--ELLLRIAKESGSEEALERA--LRVAEEAARLAKRVLELAEKQGVELVVRVAELLLRIAKESGSERVAEEAARLAKRVLELAEKQGDP-EVARRAVELVKRVAELL--ERIARESGSEEAKERAERVRE |
9 | 1vt4I | 0.16 | 0.15 | 5.16 | 0.56 | HHsearch | | NCNSPETVLEMLQKLLYQI--DPNWTSRSDHSSNIKLRIHSIQAELRRLLKNCLLVLLNVKAWNAFNLSCKILLTTRFKQ---VTDFLSAATTTHIHHSMTLTPDEVLKYLDCRPQDLPRLSIIAESWDNWKHVNCDKLTTIIESSLNVLEPARKMFDRLVFPPSDVMVVVNKLHKYSLVEKQTISIPLELKVKLENEYA |
10 | 6bfiA2 | 0.09 | 0.09 | 3.40 | 0.46 | CEthreader | | -----ASAASLAHMFHQAQDALASGDISRSTLDAVRKCISEGRRVAALAATDETRAK--LLAAADELDQILKELAHAAAVKLQELEQEIRKALAERVATDFVNVGGPIKALEDAALASPSRQANFAQKAKEFEAHTARLADTAELVASSGGCSDAVAAELRKEAAKLRDISVVPAARVVLENPGNQAAKDYLRTVKEKWL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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