Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCSSSSSSSCCCHHHHHHHHHHHHHHCCCCSSSSSSSCHHHHHHHHHHCCCCCCCCCCCSSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSCHHHHHHHHHHHHHHHHHHCCCSSSSSSSCCCCCSSSSSCCCCCHHHHHHHHHHHHHHHHHHCC PRAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
1 | 3pm9A | 0.28 | 0.28 | 8.61 | 1.50 | DEthreader | | PRAVETAFVGLQSPDDALKLLGIAQGEAAGNLTSFELIAETPLDFSVRHNNRDPLEARYPWYVLIELSSPRD-DARAALESILERGFEDGIVVDAAIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVAIGARPVPFGHLGDGNIHYNVSQDKAELARWHDVSQVVFEVVLRLGG |
2 | 6lpnA2 | 1.00 | 0.99 | 27.86 | 1.94 | SPARKS-K | | -RAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
3 | 3pm9A | 0.29 | 0.29 | 8.74 | 1.47 | MapAlign | | PRAVETAFVGLQSPDDALKLLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLARYPWYVLIELSSPRDD-ARAALESILERGFEDGIVVDAAIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALIARPVPFGHLGDGNIHYNVSQKFL--ARWHDVSQVVFEVVLRLGG |
4 | 6lpnA | 1.00 | 1.00 | 28.00 | 1.23 | CEthreader | | PRAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
5 | 3pm9A | 0.29 | 0.29 | 8.75 | 1.35 | MUSTER | | PRAVETAFVGLQSPDDALKLLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLARYPWYVLIELSSPRD-DARAALESILERGFEDGIVVDAAIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALGARPVPFGHLGDGNIHYNVSQPVGALARWHDVSQVVFEVVLRLGG |
6 | 6lpnA2 | 1.00 | 0.99 | 27.86 | 3.17 | HHsearch | | -RAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
7 | 6lpnA2 | 1.00 | 0.99 | 27.86 | 2.54 | FFAS-3D | | -RAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
8 | 6lpnA2 | 0.94 | 0.93 | 26.19 | 1.28 | EigenThreader | | RAVNVAFLGCPG-FAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
9 | 3pm9A | 0.29 | 0.29 | 8.74 | 1.41 | CNFpred | | PRAVETAFVGLQSPDDALKLLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLARYPWYVLIELSSPRD-DARAALESILERGFEDGIVVDAAIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALIARPVPFGHLGDGNIHYNVSQPV-FLARWHDVSQVVFEVVLRLGG |
10 | 6lpnA | 0.93 | 0.92 | 25.77 | 1.50 | DEthreader | | PRAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPV-E--RLYDIVTDLRAGHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|