>Q8N465 (326 residues) MLPRRPLAWPAWLLRGAPGAAGSWGRPVGPLARRGCCSAPGTPEVPLTRERYPVRRLPFS TVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCH ERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRY VEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLT SLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKSVSAEHGVGFRKRDVLGYSKPPGAL QLMQQLKALLDPKGILNPYKTLPSQA |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MLPRRPLAWPAWLLRGAPGAAGSWGRPVGPLARRGCCSAPGTPEVPLTRERYPVRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKSVSAEHGVGFRKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPSQA |
Prediction | CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCSSCCHHHHHHHCCCCCCCCCCCCCSSSCCCCHHHHHHHHHHHHHHCCCSSSCCCCCCCCCCCCCCCCSSSSSHHHCCCCSSSCCCCCSSSSCCCCSHHHHHHHHHHHCCCCCCCCCCCCCCSCCCHHHHCCCCCCSSSCCCHHHHSSSSSSSCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC |
Confidence | 98763123522454136531124554433332444335678887766566788878883439999999999974876115999986525788667689985898279999999999999981996673489866777621589939998244275046617799899938932899999999809815899540111411423553588761455264242154558996998088139967888888560123225774012112446782699963044788889999972995899999999999619546788553378999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MLPRRPLAWPAWLLRGAPGAAGSWGRPVGPLARRGCCSAPGTPEVPLTRERYPVRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKSVSAEHGVGFRKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPSQA |
Prediction | 74323323332221332333233333333322443334444345241346422465351550356005202710474012355114312311244141202000105216100300310373700000101101000001034200000043033025024721100000100153025104733000000000420020010000100010000000023200001000040200421441313001020320000002100000200010113243222000200230042422200020042015113053001001313578 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCSSCCHHHHHHHCCCCCCCCCCCCCSSSCCCCHHHHHHHHHHHHHHCCCSSSCCCCCCCCCCCCCCCCSSSSSHHHCCCCSSSCCCCCSSSSCCCCSHHHHHHHHHHHCCCCCCCCCCCCCCSCCCHHHHCCCCCCSSSCCCHHHHSSSSSSSCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC MLPRRPLAWPAWLLRGAPGAAGSWGRPVGPLARRGCCSAPGTPEVPLTRERYPVRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKSVSAEHGVGFRKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPSQA | |||||||||||||||||||
1 | 6lpnA | 0.81 | 0.65 | 18.36 | 1.17 | DEthreader | ----------------------------------------------------V-RRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCTLKDN--TG-YDLKQLFIGSEGTLGIITTVSILCPPKPRAVNVAFLLQTFSTCKGMEKGHFLEHALVDGTMVMLALRERG-------- | |||||||||||||
2 | 6lpnA1 | 0.99 | 0.80 | 22.51 | 2.35 | SPARKS-K | -----------------------------------------------------VRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPVGF------RKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPS-- | |||||||||||||
3 | 6lpnA | 0.85 | 0.69 | 19.45 | 1.05 | MapAlign | -------------------------------------------------------RLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPASPVQESPFYVLIETSGSNAGHDAEKLGHFLE-HALGSGLVTDGTM---- | |||||||||||||
4 | 6lpnA1 | 0.99 | 0.81 | 22.60 | 0.64 | CEthreader | -----------------------------------------------------VRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPVG------FRKRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPS-- | |||||||||||||
5 | 3pm9A | 0.41 | 0.32 | 9.39 | 1.56 | MUSTER | ------------------------------------------------------------TLSPELIARFTAIVGKHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHNGEVVISLKR-DKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARD-ALGVEVVLADGRV-NLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVG-------LQSPDDALKLLGIAQGEA--AGNLTSFELIAETP | |||||||||||||
6 | 6lpnA | 0.87 | 0.70 | 19.77 | 2.06 | HHsearch | -----------------------------------------------------VRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPRAVNVFLGC--------PGFAEVLQTFSTCKGMLG--EILSAFEFMDAVS | |||||||||||||
7 | 6lpnA1 | 0.98 | 0.80 | 22.34 | 2.46 | FFAS-3D | ------------------------------------------------------RRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPVGFR------KRDVLGYSKPPGALQLMQQLKALLDPKGILNPYKTLPS-- | |||||||||||||
8 | 4bbyA | 0.17 | 0.17 | 5.45 | 1.45 | EigenThreader | GIIPKKRQELM---KWNGWGYNDSKKKGQLELTGKRYPLSGVALPTINLDHKTDTPPSIV--NEDFLHELKKTNISYSQEADDRVFRAHGHCLLREERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTP--RGVIEKSCGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQQFGHALKPQVSSIFTSGFDPNQLS | |||||||||||||
9 | 6lpnA | 0.86 | 0.70 | 19.69 | 3.49 | CNFpred | -----------------------------------------------------VRRLPFSTVSKQDLAAFERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPRAVNVAFLGCP-------GFAEVLQTFSTCKGMLG--EILSAFEFMDAVC | |||||||||||||
10 | 2uuuA | 0.18 | 0.15 | 4.81 | 1.17 | DEthreader | ------QLKPSGTI------S--------------FVLDETPALQI-----------DPPKQYPEFVRELKAFFLPQLKDDKLARITHTFGKSDRVVNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVNFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPT-GTLELR-----G---INYKHIILGSEGTLGIITEAVMKVHAVPAVEYYGASALQQIRSSEVTSFDILSKNAAFGLG-WAEKRYHIS------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |