Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC MATKPTEPVTILSLRKLSLGTAEPQVKEPKTFTVEDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEP |
1 | 7crzA | 0.18 | 0.15 | 4.87 | 1.17 | DEthreader | | ---------------------------------------TQKVTPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFITPLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKSVEMLILGRLVIGLFCGLCTFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLILGSEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKE--EENAKQILQRLWG-TQDVSQDIQK |
2 | 6e9nA1 | 0.18 | 0.15 | 4.72 | 2.32 | SPARKS-K | | --------------------------------------------RRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAAFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLT--KGISKAELDYIRDGGGLVDGDA-------- |
3 | 6h7dA1 | 0.17 | 0.14 | 4.65 | 0.76 | MapAlign | | ------------------------------------------VTAFVIMTCIVAAMGGLLFGYDLGISGGVTSEFLTKFFFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFAQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMHGWRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIR--GADNV-DHEFQ-- |
4 | 4gbyA1 | 0.19 | 0.16 | 5.08 | 0.43 | CEthreader | | -----------------------------------------YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPEYVPEFVIYRIIGGIGVGLASMLSPMYIALAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIANTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHS |
5 | 4ldsA1 | 0.22 | 0.18 | 5.57 | 1.41 | MUSTER | | ------------------------------------------------LIFILGALGGLLYGYDNGVISGALLFIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSEIDKELKEMKEI |
6 | 4ldsA | 0.23 | 0.18 | 5.77 | 1.70 | HHsearch | | ------------------------------------------------LIFILGALGGLLYGYDNGVISGALLFIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSSTVPVYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSE--IDKEVIKSP |
7 | 4ldsA1 | 0.23 | 0.18 | 5.51 | 2.03 | FFAS-3D | | -------------------------------------------------IFILGALGGLLYGYDNGVISGALLFIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITY--------------- |
8 | 6thaA1 | 0.19 | 0.16 | 5.17 | 1.13 | EigenThreader | | ------------------------------------------LTGRLMLAVGGAVLGSLQFGYNTGVIKVIEEFYNQTWSILTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFGKSFEMLILGRFIIGVYCGLTTFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINREENRAKSVLKKLR---GTADVTHDLQEM |
9 | 4gbyA | 0.21 | 0.16 | 5.12 | 1.53 | CNFpred | | ---------------------------------------------YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPEYVPEFVIYRIIGGIGVGLASMLPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIA-TDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNT------------ |
10 | 5c65A1 | 0.18 | 0.15 | 4.97 | 1.17 | DEthreader | | -----------------------------------------KVTPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFIQLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKSVEMLILGRLVIGLFCGLCTFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLILGSEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKE--EENAKQILQRLWG-TQDVSQDIQK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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