Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCC MMFGGYETIEAYEDDLYRDESSSELSVDSEVEFQLYSQIHYAQDLDDVIREEEHEEKNSGNSESSSSKPNQKKLIVLSDSEVIQLSDGSEVITLSDEDSIYRCKGKNVRVQAQENAHGLSSSLQSNELVDKKCKSDIEKPKSEERSGVIREVMIIEVSSSEEEESTISEGDNVESWMLLGCEVDDKDDDILLNLVGCENSVTEGEDGINWSISDKDIEAQIANNRTPGRWTQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYGHECPEREVYDPSPVSPFICYYDDKYEIQEREKRLKQKIKVLKKNGVIPEPSKLPYIKAANENPHHDIRKGRASWKSNRWPQENKETQKEMKNKNRNWEKHRKADRHREVDEDFPRGPKTYSSPGSFKTQKPSKPFHRSSHYHTSREDKSPKEGKRGKQKKKERCWEDDDNDNLFLIKQRKKKS |
1 | 6e5oY | 0.09 | 0.08 | 3.00 | 1.08 | SPARKS-K | | AWERIDKKIAGLTSHIEREEARNAEDAQSKAVLRAKASFVLEMDEKEFYACEIQLQKWYGDLRGNPFAVEAENRVVDI--SGFSIGSDGHSIQYRN-LLAWKYLENG------------KREFYLLMNYGKKGRIRFTDGTDIKKSGKWQGL--LYGGGK---------AKVIDLTF-----DPDDEQLIILPLAFFIWNDLLSLETGLIKLANRVIEKTIYNKKIGRDEPALFVA--LTFERREVVDPSNIK-----PVNLIGVARENIPAVIALTDPEGCPLRIG-EGYKEKQRAIQAAKEAGGYSRKFASLADDMVRNSARDLFHAVTHDAVLFGRQGKRTFMTERQYTLAYEG-LTSKTYLSKTLAQYTSK--TCSCGFTI-----------------TYADMDVMLVRLKKTSDGWATTLNNK------ELKAEYQITYYNRYKRQTVSKWTKGRR-DEALFLLKKRFSHRPVQEQFVCLDCGHEVHAAEQWLFLNSNSTEFKSYKSGKQPFVGAWQAFYKRRLKEVWK--------- |
2 | 2lliA | 0.35 | 0.08 | 2.25 | 1.13 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KCNNCSQRGHLKKDCPH----IICSYCGATDHYSRHCPKAQCSKCDEVGHYRSQCPHKW-KKVQCTLCKSKKHSKERCPSIWRAYIL---VDDNEKAKPKVLPFHTIYCYNCGGKGHFGDDCKEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 3se6A | 0.08 | 0.07 | 2.79 | 1.13 | MapAlign | | ------------------------------------------------------PVATNGERFPWQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEYMK-----------------PGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTYIVCDFHSLSGFTSSGVKVSIYALDFYEKYFDIYYPLSKLDLIAIPDFAMENWGLITYRENAEVKEMMTTWTLQKGIPLLVVKQDGCSLRLQQYSTSSSNVIHQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISENLKRYLLQYFKPVIDRQSWSDKGSVWDRMLRSALLKLACIQKAAELFSQWMESSGKLNIPTDVLKIVYSVGAQTTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELGMEGKVIKT---------- |
4 | 2lliA | 0.33 | 0.07 | 2.21 | 3.42 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEAAPKCNNCSQRGHLKKDCPH----IICSYCGATDHYSRHCPKIQCSKCDEVGHYRSQCPHKW-KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAK---PKVLPFHTIYCYNCGGKGHFGDDCKEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 3mc2A | 0.06 | 0.05 | 2.25 | 0.85 | CEthreader | | AGKGTDKCACSSREPYFGSWGALKCLQDGTADVSFVKHLTVFEAMPTKADRDQYELLCMDNTRRPVEEYEQCYLARVPSHVVVARSVDGKEDSIQELLRVAQEHFGKDKSSPFQLFGSPHGEDLLFTDAAHGLLRVPRKIDISLYLGYEFLSAFRNLKRSQRVKWCAVGQQERTKCDQWSAVSGGALACATEETPEDCIAATMKGEADAMSLDGGFAYVYLSTHSSGRLGSKCVNAPLEGYYVVAVVKKSDVGITWKSLQGKKSCHTAVGTSEGSRSCAPGLCALCVGGNNPAHMCAANNAEGYHGSSGALRCLVEKGDVAFMKHPTVLQNTDGKNPEPWAKGLKHEDFELLCLDGTRKPVTEAQSCHLARVPNRAVFSRKDKADFVRRILFNQQELFGRNGFEYMMFQMFESSAKDLLFSDDTECLSNLQDKTTYKTYLGPQYLTLMDNFRQCLSSELLDACTFHKY--------------------------------------------------------------------------- |
6 | 5a1uG | 0.06 | 0.05 | 2.31 | 0.88 | EigenThreader | | EMILVCDAYRKDLQHTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFM----MLIHAD---QDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANHPAHERVL--------QDLVMDILRVLSTPDLQLA---LDLVSSRNVEELVIVLKKEVIKTNNVSEHTLHSCSVRFPLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLISLGEIPIVESEIKKEAGELKPEMGTYATQSALSSSRPTKKEEDLRGFLLDGDFASLATTLTKIALRYVALVQEKKKQNSFVAEILHLGKSDPVYAEAYVHVNQYDIVLDLQNCELATLGDLEKPSPLTLAPHDFA-----------------NIKANENGIIFGNIVAASDRNCDIHIDIMDYIQPATCTDAEFRQMWAEFQHILKSTNMKCLTPEKALSGYCGFMAANLRSIFGEDVSIEKPVHQGPDAAVTGHIRIRSQGMALSLGDKINLSQKKTSL----------- |
7 | 2lliA | 0.32 | 0.07 | 2.16 | 0.92 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEAAPKCNNCSQRGHLKKDCPHII----CSYCGATDDHYSRHCAIQCSKCDEVGHYRSQCPHKW-KKVQCTLCKSKKHSKERCPSIWRAYILVDDN---EKAKPKVLPFHTIYCYNCGGKGHFGDDCKEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6zywY | 0.07 | 0.06 | 2.63 | 1.03 | SPARKS-K | | VSKLIYVVAKRLTGHFNSAAGQLGDMKMTETE-------IFRDTYEIEEKWVQIRGVNAALPKSADCSKEPSVAPLKYSETTFETFDLRTARTYFLAKGVITLNDDELITKDYKNMTEEFIQDYIFQKVSKVYAGFQIPESEITLDKIQIILKAYNEVKIDFKDTISFKLTPYFFMVRIEQQILNNTVESFILQEGCYLLLTKEIPYFLWNCQNDYSEKIEKMKKRILWEPLGKQISDELPKNRIFVQTGRKSNYGFDIPIMQASYYMHELGTQRLGWFFKEMKEIQITQKMNHTWLIFKVDSNITFNSISKDTIALEFTDALEQSFFKIQIKYEYQVDIPAIFQES--------------QIAKKQILN------------NEQFFISYIESKQLMILNQMKDLKLSAYKNLYEQMQISQAITPVENHIRFGSDNNLRFDLNEMSELTEKSYLSGLLKFASEKKIQNATKININNIYSNFNKNPVNNVFTYGVEGYSQFLLLDTYNNYDADVNALNKTLSGVLPGAKIYKIMNNILNPALAK |
9 | 4kblA | 0.16 | 0.04 | 1.23 | 0.50 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KWCPAPD-CHHVVKVQYPDAKPVRCKRQFCFNCGENWHDPVKCKWLKKWIKECPKCHVTIEKDGGC------NHMVCRNQ----------NCKAEFCWVCLGPWEPWYNCNRYN-----ALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQ-------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5x6oC | 0.07 | 0.04 | 1.74 | 0.67 | DEthreader | | -------------------QMKVNLLKKNSRTALPD-TD--L--L--E--KYCGLSSESWDMN--SVSKTTIYPLLSSLYLASWKLKSKIVKFTLDLL-TGT------NHPLHV------FSSLIRGSLSNF-L----YISLDII-GIIEFSIFTCN----L-EG-N--QVDLRCYIFRFEYCKLLRIDEFLRT--T-------------PSDLLAQRSLET--------DSFERSALYLEYNGQLLKNLQITYEEI----K-TLKYQLYSQIISSVKEWYGLATLKNWVEQ--LIDDVLLQYNIA--LIIYISFLINFITELLKKQN--------IPQDNYMQFATMLLDIASRKRSLGIN------------------------------------------------------------------------------------------DPINWFNARNTYASYAAMFSETLMREVLMNVIETIMYIQKALK--V----------------------------LRNKIRGIPLQETQTSE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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