Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHSSSSSSCCCCCCCCCCCCCSCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MASKVTDAIVWYQKKEFLSVATTAPGPQQVLPGYCQCSLKDQGLFIQCLIGAYDQQIWEKSVEQREIKFIKLGLRNKPKKTAHVKPDLIDVDLVRGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEDAPKSGTSCSSRCSSSRQDSESARPESETEDVLWEDLLHCAECHSSCTSETDVENHQINPCVKKEYRDDPFHQSHL |
1 | 5yfpD | 0.06 | 0.06 | 2.44 | 1.33 | SPARKS-K | | VNIDIMEHSKTINKNLEQFIHDQSLNKQENEGFNRTINNINKLPVAFNIITERAKEEIHNIIVKSTESIRSKHPSLLKMATSLKN----------DNHFGLPVQDIL----------SIILRECFWEIFLKLLYAIQCHRAIFEMS---------NILQPTSSAKPAFKFNKIWLDEIELLLVRYINDPELISSNNGSEDNSSVKDQAFELKALLKDIFPGFTIVPSVLTQNTISSLTFFDDYMNKSFLPKIQMTMDYLFTVEVESNNPYALELSDENLNVFNTANTFREKISYCILDLLNHFYNYYLGLFNSLIGTSDRHLTRKIITAWLQNEQKILNGDETLFHEESIELFKEIPHFYQAGKGLSKSDLFNNLTLDTNWLPGLKKAINIDEVSQEPMLDADRLRSSWTFSESMDLNYSNPSSSPNSLGNLKILLDDKASKKFDETID |
2 | 2pffB | 0.06 | 0.06 | 2.67 | 1.13 | MapAlign | | EPTTPAELVGKFLGYKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSEISCPLIGVIQLAHYVVTAKLLGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPVPASDLINKDLVKNNVSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 2xm6A | 0.07 | 0.07 | 2.72 | 0.61 | CEthreader | | -----------VNLEQLKQKAESGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIW----------YKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRL-----------------GYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN |
4 | 6ok3A | 0.05 | 0.04 | 2.11 | 0.78 | EigenThreader | | DEEAVIQCNERYK-----------------------------TENDEKGDEETVSWCRKAAEAQYLFGLVYDGRGVQQDNCVALWW---------KAAEQNHAALVLGNLHRKGPKAIAYWKRAAVWAYHNLGTAYYDGHEAVRWWESQNNLGALYNDGNGVDRDYQEAVFWYRSLGQYNLGVAYYYGRGIKKDFSEAVSWYKKSAEQAQHNLGVTYYEGEGIKKDYAKAVYWWAAEQGIPQSQYNLGIAYEEGWGAEKNPENAVFWYRAAEQGHADAQNRLGIAYRYGTGVRKNEKAAKQGLARAQFNLGKTFYIGAGINKNTDKAVYWFIKAANQGFTEAQAYIGIYFGKYVANEKKGFYWLKKAAEK----DSAAQAFLGALYIAGNEVKPNIKEGVALTKKAALQGNYEAQTLLGFCYENGLEVKKDLIAAYALYLSASPHFDFA |
5 | 1zrtC | 0.14 | 0.06 | 2.13 | 0.43 | FFAS-3D | | -KTGIEK---WLHDRGLVYDTIMIPTPKNLNWWWIWGIVLAFTLVLQIVTGIYTPHVDLASVEH-IMRDVNGGMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNAHYLLPFVIAALV-AIHIWAFHTTGNNNPTGVEVRRTSKADA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 7aavA | 0.10 | 0.10 | 3.62 | 1.23 | SPARKS-K | | QPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQTKLDWVEVGLQRQGYNMLNLLIHRKNYNFNLKPVKTLTTKER-------KKSRFGNA---FHLCREVLRLTKLVVDSHVQYRLQLADGLQYIFAHVGQLMCKDLKHLIYYRFNTGPVGFWAAGWRVWLFFMRGITPLLERWLGNLLARQFEGRVESHFDLLRAAVMHDILDMMPEGIKQNKARTILKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKEELGLIEQAYDNPHEALTQRAFKEVGIEFMDLYSHLVPVYDVEPADKRRLFPPWIKPADTEPPPLWQDVWETSEGECNVMLESRFEKMYEKIDLTHNIADYMTAKNNV |
7 | 6hznA | 0.09 | 0.03 | 1.26 | 0.78 | CNFpred | | ARDMAKDYMERMAAQ--PSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQEKFLEVIANASGYMYETS------YRRGWGFQYLHNH--------------QPTNCMALLTGSLVLMNQGYQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVA----YGSYTTRSLFQYMFLVQRHFNIN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6vr4A | 0.08 | 0.05 | 2.11 | 0.67 | DEthreader | | ------YNKHFSSDFEQVEGA---I----I--FVEESDFES--VKFFSNLSFLPFKPLLEILDTID-------------NRNTFKLWALEDKLNKVLRGGTKNG------FIPETISFNDKIVNAFTDHFVSEKSGILSEIKVLNQRIKENIRYK--IDTVGNKGFLTEFDISHVVSDFTLNILAIETKTGPNYKNVDF-K---------------------------------------------------------------------PSAYLKEIGSLKLSKKYILEYEDVNQ---W--LLPQLVA-----GTQLQSLASNFGLDDLPGQIFIGYR-LQIVGIL---------YTEIPTKTDLITPIDFPHVKDEIKR--------------SKQTGELKFHDPLYQLKLKFTYAGGKSGVITANLD-NTYTSLREAD-------- |
9 | 2xm6A | 0.05 | 0.05 | 2.23 | 0.95 | MapAlign | | --VNLEQLKQKAESGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAADSGQQSMGDAYFDYVMAREWYSKAANVWSCNQLGYMYSR-GLGVERNDAISAQWYRKSATSGDELGQLH-------LADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWY------TKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTAKQLQQAELLSQQYIEKYAPEAW |
10 | 1zvoC | 0.10 | 0.09 | 3.38 | 0.72 | MUSTER | | QESGPGLVKP-----ETLSIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAA----D--TA-MYYARGNPPPYYDIGTGS---------GIDVWGQGTT-------VHVSSAPTKAPDVFPIISGCRHPKDNSPV----------VLACLITGYHPTSVTQSQPQRTFPEIQRRDSYYMTSS-TPLQQWRQGETASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKFVVGSDLKDAHAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNTSGFAPARPPPQPGSTTFWAWSVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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