Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHCCCCCSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCSCCCCCCSCSSSSSCCCCCSSSSSSSSCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCSSSSSSCCCCSSSSSSCCSSSSCCCCCCCCCHHHHHHHHHHCCSSSSCCCCCCCSCCSSCHHHHHCCHHHCCCCSSCCCSSSSSSSCCCCCSSSSSSSCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCC MSTAALITLVRSGGNQVRRRVLLSSRLLQDDRRVTPTCHSSTSEPRCSRFDPDGSGSPATWDNFGIWDNRIDEPILLPPSIKYGKPIPKISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKYKNSEINFSFSRSFASSGRWA |
1 | 2iq1A | 1.00 | 0.69 | 19.34 | 1.17 | DEthreader | | -----------------------------------------------------------------------------------------ISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARL---ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAW----------------------- |
2 | 4jndA | 0.17 | 0.16 | 5.20 | 1.67 | EigenThreader | | AIHDIFQKMMKRGQAVDFCHWVSHLIATEIDEKFSEVAFRDVQYNPDIYVTDSTTEAKKLFNDKAIDKILQQNAETCPILSEKWSGIH------VSGDQLKGQRHKQEDRFLAYPEDPISVLAVFDGHHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERMTVRSVKEC----WKGGSTAVCCAIDMQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGLFVIG--GELRVNGVLNLTRALGVP--GRPMISNEPETCQVPIES-SDYLVLLACDGISDVFNERDLYQLVEAFANDYELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWKLMKH-------------- |
3 | 2iq1A | 1.00 | 0.69 | 19.27 | 2.47 | SPARKS-K | | -----------------------------------------------------------------------------------------ISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLA---TLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAW----------------------- |
4 | 4jndA | 0.20 | 0.18 | 5.85 | 2.24 | SPARKS-K | | AIHDIFQKMMKRGQAVDFCHWVSHLIATEIDEKFSEVAFRDVQYNPDIYVTDSTTENDKIWPAIDKILQ------------QNAETCEKWSGIHVSGDQLKGQRHKQEDRFLAYRGEDPISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDSLEDQLRKSLELLDERMTVRSVKEC----WKGGSTAVCCAIDMQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVIG-GELRVNGVLNLTRALGDVPGRPM-ISNEPETCQVPIE-SSDYLVLLACDGISDVFNERDLYQLVEAFEDYAELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWKLMKH-------------- |
5 | 2iq1A | 1.00 | 0.69 | 19.27 | 1.50 | MapAlign | | -----------------------------------------------------------------------------------------ISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHAR---LATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAW----------------------- |
6 | 4jndA | 0.19 | 0.18 | 5.71 | 1.45 | MapAlign | | AIHDIFQKMMKRGQAVDFCHWVSHLIATEIDEKFSEVAFRDVQYNPDIYVTDSTTEAKKLFNDKIWPAIDKILQQNAETCPILSEKWSGI---HVSGDQLKGQRHKQEDRFLAYNMDDPISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDSLEDQLRKSLELLDERMTVRSVK----ECWKGGSTAVCCAIDMDKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVI-GGELRVNGVLNLTRALGDVPGR-PMISNEPETCQVPIE-SSDYLVLLACDGISDVFNERDLYQLVEAFADYAELSRFICTKAIEAGSADNVSVVIGFLRPPQDV-------------------- |
7 | 2iq1A | 1.00 | 0.69 | 19.34 | 0.95 | CEthreader | | -----------------------------------------------------------------------------------------ISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARL---ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAW----------------------- |
8 | 4jndA | 0.20 | 0.19 | 6.09 | 1.62 | MUSTER | | AIHDIFQKMMKRGQAVDFCHWVSHLIATEIDEKFSEVAFRDVQYNPDIYVTDSTTEAKKLFNDKIW--PAIDK-ILQQNAETCPILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPGEDPISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDSLEDQLRKSLELLDERMTVRSVKEC----WKGGSTAVCCAIDMDKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVIG-GELRVNGVLNLTRALGDVPGRPM-ISNEPETCQVPIE-SSDYLVLLACDGISDVFNERDLYQLVEAFEDYAELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWK-----LMKH--------- |
9 | 2iq1A | 1.00 | 0.69 | 19.34 | 1.80 | MUSTER | | -----------------------------------------------------------------------------------------ISLENVGCASQIGKRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARL---ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAW----------------------- |
10 | 4jndA | 0.21 | 0.19 | 6.05 | 2.79 | HHsearch | | AIHDIFQKMMKRGQAVHWVSHLIATEKFSE-------V----AFR-DVQYN------PDIYVTDSLFNDKIWPAILQQNAETCPILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNEDPISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDSLEDQLRKSLELLDERMTVRSVK----ECWKGGSTAVCCAIDMDKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVI-GGELRVNGVLNLTRALGDVPGRPM-ISNEPETCQVPIE-SSDYLVLLACDGISDVFNERDLYQLVEAFEDYAELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWKLMKH-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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