>Q8N2F6 (343 residues) MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCG RSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALIT LGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYIS QVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLK LLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQ PTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI |
Prediction | CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC |
Confidence | 9974412246676661334356777876424445665667763111123555566777774346654322110002234555568984554258658999999994399989999999999861368333899998187469999806999699999999998517783789999999889999985178897999999999997257872178898768999999966986999999999999407979999999819867999986468878999999999999986112022132047778541899985014689999998589879999999999619 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI |
Prediction | 7532430000000000102000000100224454644434434431443454544353445433456444444435634443742444363215373043003005337243013201200131343431240024020031024006363460133001002301344712420351014004401544343511220020010001336224201500230030044733400210020000002336103301615024300400345434600220010021025124562230234613551010002266015303410615455024200400565 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAGALEEGTSEGQLCGRSARPQTGGTWESQWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTEGLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI | |||||||||||||||||||
1 | 1wa5B | 0.14 | 0.11 | 3.88 | 1.17 | DEthreader | ----------------------------------------------------AKRDEALA--KRRNFWGTTWTLSNLCRGKKPQP--DWSVVSQ--ALPTLAKLIYS-MDTETLVDACWAISYLSGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVGNDLQTQVVINGVLPALRLLLS-SPKENIKKEACWTISNITGNTEQIQAVINLIPPLVKLLEVAEYKTKKEACWAISNASSGPDIIRYLVSQGCIKPLCDLLE-IADNRIIEVTLDALENILKMGEADKEARGL---NINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETY | |||||||||||||
2 | 4plqA | 0.18 | 0.15 | 4.74 | 1.40 | SPARKS-K | -----------------------------------------------GPGSELPQMVQQLNSPDQQELQSALRKLSQIASG---GNEQIQAVIDAGALPALVQLLSS-PNEQILQEALWTLGNIASGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIAGGNEQIQAVIDALPALVQLL--SSPNEQILQEALWTLGNIAGGNEQIQAVIDALPALVQLLSSPNEQILQEALWTLGNIAGGNEQIQAVIDAGALPALVQLLSSP-NEQILQEALWTLGNIASGGN--------------EQKQAVKEAGAEPALEQLQSSPNEKIQKEAQEALEKI | |||||||||||||
3 | 1wa5B | 0.10 | 0.10 | 3.73 | 0.66 | MapAlign | SDDMQEQLSATVKFRQILQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVV-SQALPTLAKLIY-SMDTETLVDACWAISYLSGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGDLQTQVVIGVLPALRLLLS--SPKENIKKEACWTISNITAGTEQIQAVIDLIPPLVKLLEVAEYKTKKEACWAISNASSGPDIIRYLVSQGCIKPLCDLLE-IADNRIIEVTLDALENILKMGEA---DKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETY | |||||||||||||
4 | 4rv1A | 0.14 | 0.13 | 4.30 | 0.51 | CEthreader | ----------MNDVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLL-TSTDSEVQKEAARALANIASGDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAGPDEAIKAIVGGVEVLVKLLTST--DSEVQKEAARALANIAGPTSAIKAIVDGVEVLVKLLTSTDSEVQKEAARALANIASPDEAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIAS--------------GPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANI | |||||||||||||
5 | 2ynsA | 0.15 | 0.15 | 5.07 | 1.15 | MUSTER | LTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQT--RPALPALARLIH-SNDEEVLTDACWALSYLSDGTDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDAQTQCIIDHALPCLLSLLTQNLKKSIKKEACWTISNITAGNKQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSSHDQIKYLVSEGCIKPLCDLLICP-DIRIVTVCLEGLENILK---VGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAY | |||||||||||||
6 | 4rv1A | 0.13 | 0.13 | 4.52 | 0.99 | HHsearch | TSTDSETQKRDLAAIVDAGGVEVLVKLLTSTDSEVQKEAALANIPDVDAGGVEVLVKLLTSTDS-EVQKEAAR--A-LANIASGPDEAIKAIVDAGGVEVLVKLL-TSTDSEVQKEAARALANIASGPEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTAIKAIVGGVEVLVKLLTST--DSEVQKEAARALANIASGDEAIKAIVGGVEVLVKLLTSTDSEVQKEAARALANIASPDEAIKAIVDAGGVEVLVKLLTS-TDSEVQKEAARALANIASGPDEAI-KAIVDALGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENI | |||||||||||||
7 | 4d49A | 0.16 | 0.10 | 3.50 | 1.82 | FFAS-3D | -------------------------------------------------------------------------------------------------LPQMVQQLN-SPDQQELQSALRKLSQIASGNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASNNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIELSPLVKLLDDASEEVIKEAVWAIANIASNNEQIQKLIEAGALSPLVKLLDD-ASEEVIKEAVWAIANIASGNNE--------------MKQKLEEAGALPALEKLQSHANEEVQKNAQAALEAF | |||||||||||||
8 | 1wa5B | 0.13 | 0.12 | 4.18 | 0.92 | EigenThreader | SGTSAQTKVVVDALLYTGSKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPD----------WSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTNDLQTQVVINALPALRLLL--SSPKENIKKEACWTISNITANTEQIQAVIDAIPPLVKLLEVAEYKTKKEACWAISNASSGGDIIRYLVSQGCIKPLCDLL-EIADNRIIEVTLDALENILKMGEADKEARG---LNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETY | |||||||||||||
9 | 4rv1A | 0.18 | 0.14 | 4.55 | 1.49 | CNFpred | -----GGVEVLVKLLVQKEAARALANIASG------------------------------------------------------PDEAIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASGPEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASPDEAIKAIVGGVEVLVKLLTST--DSEVQKEAARALANIASPTSAIKAIVGGVEVLVKLLTSTDSEVQKEAARALANIASPDEAIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASG--------------PDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANI | |||||||||||||
10 | 1ialA | 0.16 | 0.13 | 4.17 | 1.17 | DEthreader | ----------------------------------------VS----------------SGTSQ---EQVWALGNIAGDGSRNKNPA-PPLDAVE-QILPTLVRLLHHNDPE-VLADSCWAISYLTGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVGTDEQTQKVIDGALAVFPSLLTNP-KTNIQKEATWTMSNITARQDQIQQVVGLVPFLVGVLSKADFKTQKEAAWAITNYTSGVEQIVYLVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQAAEKL--G------ETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |