Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHCCCCSSCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCSSSSSSCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC MAKWVPALLLRRVPLFSLRFRPASSTFLPVLAATEPAVSVPSGDLSMPVKTRAEGEDDGFGEAGDPRRLLERPWRFRGCLPGKGNRDVGFEGTEGPTSTRPEWVWSCRCCLGCRASTRERVTSPVRAAGPQPRFTDRETEAAAGTLAHMGFAPPTSFSHFTDQELRDCSSLECLGVVEGDPHVLCSTLSLSRPSPSATLTLLLASSCLLAPAPPSFILLLFTLIAPDLPHS |
1 | 1lshB | 0.10 | 0.07 | 2.73 | 0.62 | CEthreader | | -----------SKPKVVIVLRAVRADGQQGLQTTLYYGLTSNGLPKAKIVAVELSDLSVWKLCAKFRLSAHMKAKAAIGWKNCQQYRAMLEASTGNLQSHPAARVDIKWG---RLP---------------------SSLQRAKNALLENGAPVIASKL-------EMEIMPKAN-----QKHQVSVILAAMTPRRMNIIVKLPK-------------VTYFQQGILLPFT |
2 | 5l4kR | 0.09 | 0.08 | 2.99 | 0.50 | EigenThreader | | GDAAVRDELMAAVRD--------NNMAPYYEALCKSLDWQMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTV-----------ALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDF-------KQAAELFLDTELMDYKTFVTYTVYVSMIALERPDLREKVILEVLHSLPAVR |
3 | 6lntD | 0.14 | 0.10 | 3.25 | 0.31 | FFAS-3D | | ----------------------------------AYYMYLDRNDAGEAISFPTTGMNKCYIQIMDLGHMCDATMSYE-CPMLDEGVEP--DDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVTLPSHSTRKLQTRSQT----------WLESREYTKHLIRVE-----------------------NWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAP----- |
4 | 2blmA | 0.09 | 0.08 | 3.14 | 0.78 | SPARKS-K | | --DDFAKLEEFDAKLGIFALDTGTNALTVGVLLQQKSIEDLNQRITYTLVNYNPITEKHVDTGMTLKELADASLRYSDNAIGGPERKIGDEVTNPERFEPE--------LNEVNPGETRALVTSLRAFALEDKLPSEKRELLIDWMKRNTTG-DALIRAGVPDG-------WEVADKTGSYGTRNDIAIIWPPGDPVVLAVLSSRDKKDAKYDDKLIAEATKVVMKALNMN |
5 | 5wu5A | 0.06 | 0.02 | 0.92 | 0.58 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------LELVGSILRG-------CVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSLS--NRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQ------ |
6 | 3ee1A | 0.07 | 0.05 | 1.95 | 0.67 | DEthreader | | --------------------------EK-KLDS-FS-PSLSQGEFLICLSS----------KE-Y-NNLLSSLPKQF--------------HTITAPVSAEVAINCC--------FNVWLININEF-----IDSKKE--LQL-LFQDPAFISLTSAFWQSL--N-NCG-HIIKINAVVPGRAYEVSSSILPSHIVGINKIETSYLVHAGTLGNAIPESRQVSFAIISP-D- |
7 | 1vt4I3 | 0.08 | 0.07 | 2.97 | 0.79 | MapAlign | | ----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
8 | 2blmA | 0.14 | 0.13 | 4.45 | 0.39 | MUSTER | | FAKLELGIFALDTGTVAYRFAFASTILT-VGVLLQ---QKSIEDLNQRITYTRDDLVNYNPITEKHVD---TGMTLKELADA-RYSDAAQNLKQGGPESLKKELRK----IGDEVTNPERFEPELNEVNPETQDT-RALVTSLRAFALEDKLPSEKRELLIDKRNTTGDALIRAGVPDGSYGTRNDIAIIWPPKGDPVLAVLSSRDKKDAKYDDKLIAEATKVVMKALNMN |
9 | 1vt4I3 | 0.18 | 0.08 | 2.67 | 0.68 | HHsearch | | -------------------------------------------------------------EYALHRSIVD----------------------------------------------HYNIPKTFDSDDLIPPYLDQYFYSHIMTLFRMVF----LDFRFLEQKIRHD-----------------STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNDFLPKIEENL |
10 | 5tc1M | 0.10 | 0.10 | 3.81 | 0.54 | CEthreader | | ENETFVYRSNWTPGRFNSTGAKTKQWHYPSPYSRGALSVTSIFSLDARSCYSLFPVSQNLTYIEVPQNVANRASTEVLQKVTQGNFNLGVALAEARSTASQLATQTIALVKAYTAARRGNWRQALRYLALNEDRKFRSKHVAGRWLELQAYEMLTKVHLQEFLPMRAVRQVGTNIKLDGQTTCNISRRIVIWFYMSGTVTDVITGESIIQGTAKAQISAMHRGVQSVWPTT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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