Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCHHHHHHHHHHHHHHHCHHHCCCCCSSSCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCCHHHCHCCCCSSSCCCCHHHHHHHHHHCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCSCCCCCHHHHCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCCSSSSSCCCSSSSSCCCCCCCCCHHHHHHHHHCCCHHHCCCCCSCCCCCSSSSSSSCCCCSSSSSSCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC MTTAQRDSLLWKLAGLLRESGDVVLSGCSTLSLLTPTLQQLNHVFELHLGPWGPGQTGFVALPSHPADSPVILQLQFLFDVLQKTLSLKLVHVAGPGPTGPIKIFPFKSLRHLELRGVPLHCLHGLRGIYSQLETLICSRSLQALEELLSACGGDFCSALPWLALLSANFSYNALTALDSSLRLLSALRFLNLSHNQVQDCQGFLMDLCELHHLDISYNRLHLVPRMGPSGAALGVLILRGNELRSLHGLEQLRNLRHLDLAYNLLEEEKEGKEEKEEGEMVEQGEEEAGEEEETSAHLFEVELQAARTLERLELQSLERCGLRSVDHRLRLFLDVEVFSDAQEEFQCCLKVPVALAGHTGEFMCLVVVSDRRLYLLKVTGEMREPPASWLQLTLAVPLQDLSGIELGLAGQSLRLEWAAGAGRCVLLPRDARHCRAFLEELLDVLQSLPPAWREKDSSLEARQFFYLRAFLVEGPSTCL |
1 | 4u08A | 0.20 | 0.16 | 4.99 | 1.53 | SPARKS-K | | --------------------------------------QTYYRNITEALKNPQNVRILNLSGSKLTTLPGEIGKL-------QNLQLLNLD--DNQLIALPKEIGKLQNLQQLHLSKNQLA-LPEEIGQLQNLQKLKLYENLTAIPKEIGQL----------QNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLKEIGQLQNLQILHLRNNQLTTL-----PKEIGQL-----QNLQKLLLNKNKLTTLPIGQLQNLQKLKLY---ENQLTTLPKEIGQDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQRNLESLDLEHQLNALPKEIGKLQQTLNLKYLATLPEEIKQLNLKLYLHNNP-----LP------SEKIARIRKLLPQCIIYF--------------------------- |
2 | 4u08A | 0.19 | 0.15 | 4.89 | 1.32 | MUSTER | | ---------------------------QTYYRNITEALKNPQNVRILNLSGSKLTTGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNLATLPEDIEQL----------QRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQL--------QNLQELD---LDGNQLTTLPENIGQLQRLQTLNFLPKEIGQLRNLESLDLEHNQ-LNALKEIGKQKLQTLNLKYQLATLP---------EEIKQLKNL------KKLYL----HNN-------------PLPSEKIARIRKLLPQC-----------IIYF------------ |
3 | 6m04A | 0.14 | 0.11 | 3.83 | 1.14 | FFAS-3D | | ---VREESSFSDILLHMVDQYDQLYSKRFGVFLSEVSENKLREISEKLRQHISRNAQDKQELHLFM--------LSGVPDAVFDLTDLDVLKLELIPEAKPAKISQMTNLQELHLCHCPAKEQTAFSFLRDHLRCLHVKFTLKNLRNNKMIGLESLRELRHLKHLTKLVIHNDGTKLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNLQELDLKSNNIRTIIISFQHLKRLTCLKLWHNKIVTIPSITHVKNLESLYFSNNKLESLPVAVFSLQKLRCLDVSYNNISMIP--------IEIGLLQNLQHLHITGNKVDQLFKCIKLRTLNLGQNCITSLPEKVGQLSQLTQLELKCFDRLPAQL-GQCRMLKKSGLVVEDH------LFDTLPLEVKEALNQDI------------------------------------------------------------------------- |
4 | 5il7A | 0.19 | 0.15 | 4.76 | 2.76 | CNFpred | | --------TLDRIIQPLESL-----KSLSELSLSSNQITDISPLASLN-------SLSMLWLD-----RNQITDIAPLA-SLNSLSMLWLFGN---KISDIAPLESLKSLTELQLSSNQITDIAPLA-SLKSLTELSLSGNISDIAPLE-----------SLKSLTELSLSSNQITDI-APLASLKSLTELSLSSNQISDIA-PLESLKSLTELQLSRNQISDIAPL-ESLKSLTELQLSSNQITDIAPLASLKSLTELQLSRNQISDIA------PLESLN-----SLSKLWLNGNQITDIAPASLNSLTELELSS---NQITDIAP-STLWLSSNQISDIA-PLASLESLSELSLSSN-DISPLASLN--SLTGFDVR------------------RNPIKRLPETITGFDMEILWND-SGFITFFD-PPEIVKQGKEAVRQYFQSIE------------------------------ |
5 | 4rm6A | 0.06 | 0.05 | 2.03 | 0.83 | DEthreader | | ARDLPQGSSVVVGEADQKTPTQPDAN--S-VAYNRVT-GNASQ--I----------Q-GKL-------------TANGKVYINVAGLFATTKTRVKEGQVINKGKIKAKDF-VVLNGDKVI-NE-GEIDATNNGKVYLSSGQSIV-QNEGIIK-----NGVLEATGKVVLSADDV-QLNNKSDIKGESEVVFTNNKIKITSQTGS-KVTSPKINFTGKSVNINGDFGRDDHLDTEVNIDVPSFIQTLSSLLANNGK-VNLKGKDVNISGRIHIDSFR-SDS--LLK---LT-NQGHIKINHAIHSGRLFFITSLQNEKSQSDITITSIGAMGLGRSLDQRKKFDVFKKVNLINFYID-GEYGV---------------HRFRSTIKDTEINISNSLDNSKIDITFDKDNSIQINRL------IKIV--SAKAPYATMFYTFRTITAIITA---------DKING---------------- |
6 | 4u06A | 0.19 | 0.13 | 4.17 | 1.50 | SPARKS-K | | ----------------------------------------------------------------------TYRDLTKALQNPLEVRVLDLS--RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNLTTLPKEIEQL----------KNLQVLDLGSNQLTVLPQEIGQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFKEIGQLQNLKVLFLNNNQITIL-----PNEIAKL-----KKLQYLYLSDNQLITLPIEQLKNLQTLDLS---YNQLI-LPKEVGQLLDLRNLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKKNLLWLSLVYQLTTLPN---------EIEQLKNLTLYLNNNQF----------------SSQEKKRIRKLLPKCQIYFD------------------------------ |
7 | 4u7lA | 0.14 | 0.11 | 3.76 | 0.55 | MapAlign | | ------LSYNKLSEIDPAGFE-DLPNL-QEVYLNNNEL-----------------------------------TAVPSGAASSHVVSLFLQHNKIRS-VEGSQLKAYLSLEVLDLSLNNIVRNTCFPHGP-PIKELNLAGNRI-GTLEL-GA------FDGLSSLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEGTFQGLNSLEVLKLQRNNISKLTDAFWGLSKMHVLHLEYNSLVEVNSLYGLTALHQLHLSNNSIARIHR-------KGWSFCQKL--HELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHAEGAFKGLLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLAFSGLEGLEHLNLGGNAISVQFDAFVKMKNLKELHISSDSFLCDCQLATCAHPESLKGQSIFSVPPESF--------------------------------------------- |
8 | 5hyxB | 0.14 | 0.14 | 4.73 | 0.34 | CEthreader | | LSSLQLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIPMEIELMLFDNKLSGEIPRSIGELKNLQVLRAGGNKNLRGELPWEIGNCENLVMLGLAETSLSGLPASIGNLKRVQTIAIYTS--------LLSGPIPDEIGYCTELQNLYLYQNSISSIPTTIGGLKKLQSLLLWQNNLVKIPTELGNCPELWLIDFSENLLTTIPRSFGKLENLQELQLSVNQISGTEELTNCTKLTHLEIDNNLITGEIP---------SLMSNLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSSIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTNLYRLRAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLHTNSLSGSLLGTTLPKSLKFIDFSDNALSSTLPPGIGLLTELTKLNLAKNRLSGEIPREISTCRSLQLLNLGE |
9 | 4r5dA | 0.22 | 0.19 | 5.99 | 1.24 | MUSTER | | -ATITVSTPIKQIDDAFAETIKANLKKKSVTDAVT--QNELNSIDQIIANNSD--------IKSVQG--------------IQYLPNVRYLALGGNKLHDISALKELTNLGWLNLSNNQLETLPGVFEKLTNLTTLNLSNN------QLTSLPQGVFE--RLASLTTLNLSNNQLTSLPGVFERLTNLTTLNLSNNQLTSLQGVFERLTNLTTLNLSNNQLTSLPQVFERLTSLTTLNLSNNQLTSLPVFERLTNLKTLNLSNNQLTKVANALKQAASLHELHLSNNNIGEEGAAE--LVEALLHPGSTLETLDLSNLTKEACREIARALKQATTLHELHLSNNNIGEEGAAELVALLHPGSTLETLDLSNCNL-----TKEACREIARALKQATTLHELHLSNNNIGEGAAELVEALLHPGSTLETLDSN----KEACREIARALKQA-----------TSLHELHL--------SNNI |
10 | 6hluA | 0.17 | 0.16 | 5.14 | 0.90 | HHsearch | | ----SDLDVIRQIEQELGMQLEPLKWYSKGYKLDK--DQRVT------------------AIGL--YDCG-SDTLDRIIQPLESLKSLSELSLSSNQITDISPLASLNSLSMLWLDRNQITDIAP-LASLNSLSMLWLFNKISDIA-PLESLKNDIAPLASLKSLTELSLSGNNISDIAP-LESLKSLTELSLSSNQITDIAP-LASLKSLTELSLSSNQISDIAP-LESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPELNSLSKLWLNGNQITSLTELELSSNQITDIALASLKSLSTLWLS---SNQISDIA-PLELSLSSNQISDISP-LASLNSLTGFDVRRNPIKRLPETITGSSSGFITFFDNLESPPPEYFQSEALVHLQEIKVHLIGDGMAVVTKQAPNIKKECLMLLLDSRTD-SNKHYWLRHIEKYGGKSPKIDENPYNIEQKKINRFAIERFRISC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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