Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHSCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCHHHHHHHCCSSSCCCCCHHHCCCCCCCCCCCCCCCCSSSSCCCCCCCCCSCCCCCCSSSCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCSSSSSCSSSSSCCCCCCCCCCCSSSSCCCCSSSSCCHHHHHHCCCCCSSSCCCCCCCSSSSSSSSSSSCCHHHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCCSSSCCCCCCCCCHHHHHHHCCCCCCCC MSYPTKEGSDTAGNAHKNSENEPPNDCSTDIESPSADPNMIYQVETNPINREPGTATSQEDVVPQAAENSELETEIQKDQREEDLKEELLLLQTPIPRKLVSHKPLNDRSRSHSGKVEMKANNFPINHKTRFRLSTSWRVPFINSHEIRSMILHLLCDRYFSQAAGCQNTMWVKRKYIACLYHPNSFTHHERAITFRRPSRVHYYRPLTERMTSGKFCKSTDTKGKCRFRAIVRSVLFVSQIQIESIFNIKGFVDILTYIHTMNVMITNTNNGWKYFCPICGRLFNTYSELRQHSCSSSGN |
1 | 1vt4I | 0.04 | 0.04 | 1.99 | 1.03 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 1vt4I3 | 0.04 | 0.04 | 2.13 | 1.66 | MapAlign | | HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKYTDLLRIALAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 5ifeA | 0.08 | 0.08 | 3.06 | 0.70 | CEthreader | | EEPEFSSAMPLEDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFE--MDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMFLYLNIGLQNGVLLRTVLDPVTGDLSDTRT |
4 | 1sqfA | 0.05 | 0.05 | 2.13 | 0.65 | EigenThreader | | RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMLLAEFNASDARYLLLKRLQKAYQSIVEANNQRPPMWLRINRTHHSGMKHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLA--------------------PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKA-TVKQGDRILLDAPCLAQLQSEILDAIWPHLKTGGTLVYATCNLPGDGFFYAKLIKK------------------ |
5 | 6w17E | 0.14 | 0.07 | 2.49 | 0.38 | FFAS-3D | | --MPAYHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYQMDIIDECRANCFFRNFEIKGPADRTLIYGTLFSECLGRVNGLNYRDAERQSLALENFSIPGS--AGFPLNALYAPPLSPQDAEI-------------------MRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTKRRFM--------------------------------------------------------------------------------------------------------------------------- |
6 | 4igbA1 | 0.11 | 0.09 | 3.15 | 0.54 | SPARKS-K | | --LYFQGAMAKNGTDISTLDIRKFNLNINNVSVLSKSQSVDQFHLSNPHYEYLSGGAYPG---------------------------EMENFTLKVDKS-------KKQDQVFENPLSLKFTNITVNKQVDAYLNFNKVTLHLNTAQAESEMNS-------AQKSELWESNAFEIGNVPYVDHDYIM-NKAFWIDADVTAEIRYATDLKLVMKPTDIDAIDANNLKETFYVKVNLRLMNNANVLVQEIATQITGGSYNENNVSGLALRSNSNSMNFGYSSCSAVFGLYI------------ |
7 | 3e0dA | 0.09 | 0.03 | 1.02 | 0.63 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------GAAKLQDLLKWVKETT-------------PEDPALAMTDHGN----------------LFGAVEFYKKAT------------AMGVKPIIGYEAYVAAESRFDRK------------GYFHLTLLAKDTGYQNLVRLASRAYLEG------------- |
8 | 6u5vB | 0.07 | 0.05 | 1.93 | 0.67 | DEthreader | | DQSEKFNYPPM--PFDGVLFHHFGGDRHVSNPLDILTLTAFENIKGD---------TSKAPSSIRALVEEWAANNVRIEQPT-TT-Y-VFTGQGQEINELTIHFKGRAIRDN--------FKDIDET----DVFYGMQVR-GRS-NYGMVAV---LR-VVDEV-N------EIVNYYVAA------ERGFVIPLKISVPFHS--------------------------------LMGVPFQRFLCKKIPKSSVKPQDLIFELYSVYDLT----K-S-------EKIKSILD---------- |
9 | 5ifeA | 0.06 | 0.06 | 2.52 | 1.53 | MapAlign | | SFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPESLCIVEMFLYLNIGLQNGVLLRTVLDPVTGDLSDRTGSRPVKLFRVRMQGQEAVLAMSSRSWLSYFASGFASEQCPEGIVAISTNTLRILALIIETDHNAYTEATKAQRGKKKLLRKCENKHIANYISIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADD |
10 | 5v3jE | 0.16 | 0.13 | 4.22 | 0.94 | MUSTER | | -----------------------PHKCKE--GKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPS---------NAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLT-----HAGARRFECKDCDKVYSCASQLALHQMSHTG-----EKPHKCKECGKGFILLRHQSVHTETPYKCKECGKGFRRGSELARHQRAHSGDKPYKC--KECGKSFTCTTELFRHQKVHTGDR----------PHKCKECGKAFIRRSELTHHERSHSGE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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