Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHCCCCCSSSSSCCCCCSSSSSSCCHHHHHHHHSSCCCSSSSSSSSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCSCCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSSCCCCCSSSSSCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCSSSSSSSSSSCCCCSSSSSSSSCCCCCHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSSCCCCCCCCCCCCCCSSSSSCCCSSSSSSCCSSSSSCCCCSSCCCHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCCHHHHHHHHCCCSSSSSSCCHHHHHHHHHHHHHHCCCCSSSSSCCHHHHHHHHHHHHCCCCCSSSSCCCCCCCCHHHHHHHHHHCCCCSSSSSCCCHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPYAEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYRNKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTPYSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS |
1 | 5xj1A | 0.26 | 0.18 | 5.44 | 1.00 | DEthreader | | -----M------VEVE-V--LT--------------------------------VDGL-VFFVENALPSEKILM-R-------------------------V-LKV------FGKV--------------------------EKYLVQSPH-RNQ--D----LDLAYLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAG------------I---------ADVEVAETLGMEHPVKYRNKAQVPVRRV-N---GV-L-ETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHSGQIMVVLVTT-R-PK--VF-RVDQLIEQV-IKQ---FPEIVSVMQNINDQNTNAI-FGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQ-PTVILVDPPRKGLTESFIKASAQTG-ADRIAYISCNVATMARDIKLYQE--------LGYELKKVQPVDLFPQTHHVETVALLSKLD-V--------------------------------- |
2 | 5xj1A | 0.25 | 0.18 | 5.56 | 3.58 | SPARKS-K | | -------------------------------------------------------------MLKKN----DIVEVEIVDLT----------------HEGAGVAKVDG-LVFFVENALPSEKILMRVLKVNKKGFGKVEKYLVQ--SPH-----RN-----QDLDLYLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAGIAD---------------------VEVAETLGMEHPVKYRNKAQVPVRRVNG------VLETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHYGQIMVVLVTTRPKVFR--VDQLIEQVIKQFP-------EIVSVMQNIN-DQNTNAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQPT-VILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQEL--------GYELKKVQPVDLFPQTHHVETVALLSKLDV---------------------------------- |
3 | 5xj1A | 0.24 | 0.17 | 5.38 | 1.61 | MapAlign | | -------------------------------------------------------------------MLKKNDIVEVE-IVDLTHEGAGVAKVDGLVFFVENA---LPSEKILMRVLKVNKK-IGFGKV--------------------EKYLVQSPHRNQDLDLAYLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIA---------------------GIADVEVAETLGMEHPVKYRNKAQVPVRRV------NGVLETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHSGQIMVVLVTTRPKV--FRVDQLIEQVIKQF-------PEIVSVMQNINDQNT--NAIFGEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLK-EGIQPTVILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQ--------ELGYELKKVQPVDLFPQTHHVETVALLSKV------------------------------------ |
4 | 5xj1A | 0.24 | 0.17 | 5.35 | 1.38 | CEthreader | | ----------------------------------------------------------------------------------MLKKNDIVEVEIVDLTHEGAGVAKVDGLVFFVENALPSEKILMRVLKVNKKGFGKVEKYLVQSPHRNQDLDLA-----------YLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAGIAD---------------------VEVAETLGMEHPVKYRNKAQVPVRRVNG------VLETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHYSGQIMVVLVTTRPKVF--------RVDQLIEQVIKQFPEIVSVMQNINDQNT-NAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQPT-VILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQE--------LGYELKKVQPVDLFPQTHHVETVALLSKLDV---------------------------------- |
5 | 5xj1A | 0.25 | 0.18 | 5.52 | 2.38 | MUSTER | | -------------------------------------------------------------MLKKN----DIVEVEIVDL----------------THEGAGVAKVD-GLVFFVENALPSEKILMRVLKVNKIGFGKVEKYLVQ------------SPHRNQDLDLAYRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAGIAD---------------------VEVAETLGMEHPVKYRNKAQVPVRRVNG------VLETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHSGQIMVVLVTTRPKVFR--VDQLIEQVIKQF-------PEIVSVMQNI-NDQNTNAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQP-TVILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQEL--------GYELKKVQPVDLFPQTHHVETVALLSKLDV---------------------------------- |
6 | 5xj1A | 0.25 | 0.18 | 5.64 | 3.61 | HHsearch | | -----------------------------------------------------------------MLKKNDIVEVEIVDLT----------------HEGAGVAKV-DGLVFFVENALPSEKILMRVLKVNKKGFGKVEKYL--VQSPH-----RN-----QDLDLYLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAGIA---------------------DVEVAETLGMEHPVKYRNKAQVPVRRV-NG-----VLETGFFRKNSHNLM-PEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGYSGQIMVVLVTTRPKVFR--VDQLIEQVIKQ-------FPEIVSVMQNINDQNT-NAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGIQPT-VILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQE--------LGYELKKVQPVDLFPQTHHVETVALLSKLDV---------------------------------- |
7 | 5xj1A | 0.25 | 0.18 | 5.52 | 3.59 | FFAS-3D | | --------------------------------------------------------------LKKN----DIVEVEIVDL----------------THEGAGVAKVDG-LVFFVEN-----------ALPSEKILMRVLKVNKKIGFGKVEKYLVQSPHRNQDLDLAYLRSIADLGHLSYPEQLKFKTKQVKDSLYKIA---------------------GIADVEVAETLGMEHPVKYRNKAQVPVRRVNG------VLETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHYSGQIMVVLVTTRPKVFRVDQLIEQVIKQ---------FPEIVSVMQNINDQNTNAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKE-GIQPTVILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQE--------LGYELKKVQPVDLFPQTHHVETVALLSKLD----------------------------------- |
8 | 5xj1A | 0.25 | 0.18 | 5.47 | 1.33 | EigenThreader | | ------------------------------------------------------------------MLKKNDIVEVEITH-----------------EGAGVAKVDG---LVFVENALPSEKILMRVLKVNKKIGFGKVEKYLVQSPHRN----------QDLDLAYLRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAG--------------------IADVEVAETLGMEHPVKYRNKAQVPVRRVN------GVLETGFFRKNSHN-LMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHSGQIMVVLVTTRPKVFR--VDQLIEQVIKQF-------PEIVSVMQNINDQNTNA-IFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKE-GIQPTVILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQEL--------GYELKKVQPVDLFPQTHHVETVALLSKLDV---------------------------------- |
9 | 5xj1A | 0.26 | 0.19 | 5.72 | 3.74 | CNFpred | | ----------------------------------------------------------------------DIVEVEIVDLT-----------------EGAGVAKVD-GLVFFVENALPSEKILMRVLKVNKIGFGKVEKYLVQSP-------HRNQ-----DLDLALRSGIADLGHLSYPEQLKFKTKQVKDSLYKIAGIA----------------------VEVAETLGMEHPVKYRNKAQVPVRRV------NGVLETGFFRKNSHNLMPLEDFFIQDPVIDQVVVALRDLLRRFDLKPYDEKEQSGLIRNLVVRRGHSGQIMVVLVTTRPKVF--RVDQLIEQVIKQF-------PEIVSVMQNINDQ-NTNAIFGKEWRTLYGQDYITDQMLGNDFQIAGPAFYQVNTEMAEKLYQTAIDFAELKKDDVIIDAYSGIGTIGLSVAKHVKEVYGVELIPEAVENSQKNASLNKITNAHYVCDTAENAMKKWLKEGI-QPTVILVDPPRKGLTESFIKASAQT-GADRIAYISCNVATMARDIKLYQEL--------GYELKKVQPVDLFPQTHHVETVALLSKLDV---------------------------------- |
10 | 2vs1A | 0.23 | 0.14 | 4.40 | 1.00 | DEthreader | | -----------HM-G--R--LN--------------------------------------GVLKGILVPFSDEIIV-------------------------ERVE-------ASQW--------------------------KLVRSS-PLR-V--------------KCGGCTLQHLNYDYQLEFKRKKLKRILG----------------------------FEV-EVVPSPKIFGHRNRIDLAITKD----------GIGFRE-KWWKIVDIDE-PVFGKTSREAIERLKEFIEEEKISVWNIKKDEGFLRYMVLREGKTEEVMVNFVTK-EGN----L--PD--PTNYFD--------FDSIYWSVNRSKSDVS-Y-GDIERFWGKEFIRERLDDVDYLIHPNSFFQTNSYQAVNLVRKVSELVEG---EKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREV-S--VK--GF--DTVIVDPPRAGLHPRLVKRLNREK-PGVIVYVSCNPETFARDVKML----------D-YRIDEIVALDMFPHTPHVELVAKLV-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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