Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC MAAGSTTLHAVEKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQHVGDFARDLAARWKKLVLVDRNTRPGPQDPEESASRQRFGEALQDQEKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGRYRASPTRTAPLRMPEGPEPAAPGKQPGRGHTHAAQGGPLLCPGCQGQPQGKAVVSHSKGHKSSRQEKRPLCAQGDWHSPTLIREKSCGACLREETPRMPSWASARDRQPSDFKTDKEGGQAGSGQRVPALEEAPDSHQKRPQHSHSNKKRPSLDGRDPGNGTHGLSPEEKEQLSNDRETQEGKPPTAHLDRTSVSSLSEVEEVDMAEEFEQPTLSCEKYLTYDQLRKQKKKTGKSATTALGDKQRKANESKGTRESWDSAKKLPPVQESQSERLQAAGADSAGPKTVPSHVFSELWDLSEAWMQANYDPLSDSDSMTSQAKPEALSSPKFREEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCAQVLRNNPDALSDVGEVPYWVLEPVLEGWRPDQLYRRKKDNHALVRETDELRRNHCFQDFKEEKPQENKTWREQYLRLPDAPEQRLRVMTTNIRSARGNNPNGREAKMICFKSVAKTPYDTSRRQEKSAGDADPENGEIKPASKPAGSSHTPSSQSSSGGGRDSSSSILRWLPEKRANPCLSSSNEHAAPAAKTRKQAAKKVAPLMAKAIRDYKRRFSRR |
1 | 3mkqA | 0.08 | 0.08 | 3.19 | 1.03 | CEthreader | | EIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA-VHPTKPYVLSGSDNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLILN |
2 | 5jcss | 0.11 | 0.10 | 3.71 | 1.68 | SPARKS-K | | ----------------TFVPTHKTVSSLRQLGRKISTPIMLI-----GKGKT-------FLINELSKYM----DSIVKIHLGEQTDTSGDKPGTFEWRVKESILLSLLEKRESRGETVKAANGVRINEDHQKDSSNKIYNLNMIGMRELEEPSEEDLTHILAQKFPILTNLIPSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQS-SVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLKTTVVQQLAKMLQQTETKPKTVAVPATFSLKKNEKFHKMLHRCFNKNQWKVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDWADFNDSVKKFEAQSSSIENSFVFNKTIRAGEWLLLDVNLATLESISDLLTEPDSILLSEKGDAEPIKAHPDFRIFAGKRIRSRFEIYVHSPERDITDLLSIIDKYIGKYNDIAELYLEAKK---LSDNNTIVDRTLTRTLLYVTDIIHIYGLRRSLYDGFCLTLLDQKSEAILKPVIEKFTRLKNVKMNLVRATSGKMIKYLADITEGRKGYWIVLDELNLAPTDVLEALDDNRELFIPETQEVVHPHPDFLLFATQNPPGIYGGRKILSRAFRNRFLELHFDDIPQDELEIILRE---RCQIAPSYAKKIVEVYRQLSIERSAS |
3 | 3mkqA | 0.08 | 0.07 | 2.94 | 1.53 | MapAlign | | FHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV-----------------WSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLAVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEY------YEEALNISPDQDQKFELALLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESL-FLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLI--- |
4 | 1zlgA | 0.10 | 0.08 | 2.83 | 1.18 | MUSTER | | ----------------------------------------------------------------------------------AAGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCLEP------KESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQSSKFNISIEQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVDLPEEPDIPVHSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRVRWFPEACAHNRTTGSEASSGMTHENYIIL---FSCKYKVTVQP---------------IRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGH--------VLSKVLAKP-------------------------ENLSASFIVQDVNITGHFS------KMAKANLYQP-TWAEVTTESRQNSLPNSIISQSQILPSDHYVPGGEGPATIKTFRTPELPPSSAHRSHLKHRHPSPERYGKPIPNPL-------------DSTRT |
5 | 4hfxA | 0.66 | 0.05 | 1.44 | 3.04 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVLERCTPDQLYRIEEY------ETDQLWKVHC----KEERPEEYESWRE-YLRLQDAREQRLRVLTKN-------------------------------------------------------------------------------------------------------------------------------- |
6 | 6n7pX | 0.08 | 0.07 | 2.70 | 1.68 | SPARKS-K | | KAFEDDIKFLSEAIMNEYGHEDYNNALLSTLNAVVEQPQKQAAIALLTMVVNSKN---NVAGKSIINYFFEELQKWCKQTYNDEFKSTSNETGPWNKSPMELSIELNNLD--PGNRVLFFFNRNNDGLRTKVEELLAYVEQNYLVKTTDINNGEPPYEMVELLINNLEQLNELFPDWNHLLTPQTGDEGFNDALTLPSVDD---LKSFVRLNKNFGSVDSMWKTPRHVYLPNSAGNFETVVPISTYAGQLFNDIIIDLVESLEFNRKEITLDLFFKAGIFTEPGESIENPLAPTFKIEDLAIETILGLIFKLPSVSQPFICQNSPKAI-APVFGRAFRFFYSHLDSSNFNFSWKIKFGKYFYNLTSNFSEVEDSLPQE----FTKYL----DTSYIPRDQLINYYQSLFTGYTVEEDSVRKNDLYFRQEGVPMENTVRKILDYTHKA--NNSREVTELESILGELKNE-------------YGSIISD----------------FNRFVIILLVQAGSRS---------LSHANKYINDLKEDLKTIFA-------------KIEL--DIETKEYIIIEAVLTFWNANTIFTFTGLKNNGLIEAIEAVFRNLSQQISEENESGNNFEFVFERLCT--------------IANSTIDLLDVNADE-------DIEIPKVNGEMDIDDIEDDKLDLKWKYFTVIGFIKSIRRYSHEYRELADKFIANIDNAIPHESTRRTISNWIQETKEV---- |
7 | 2pffB | 0.07 | 0.07 | 2.79 | 1.29 | MapAlign | | DTTLVKTKELIKNYITARIMAKRPFIKFSAETLSESIPISCPLIGVIQLAHYVVTTGHSQGLVTAVVRKAITVLF--------FIGVRCYEAYPNTSLPPSILEDSLENNEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFS--ILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFEEINEHSTSYTFRSEKGLLSAQFTQPALTLMEKAAFEDLKSKSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVE-------------------NQQYVAAGDLRALDTV--- |
8 | 3chnS | 0.08 | 0.06 | 2.39 | 1.15 | MUSTER | | -------------------------------------------------------------------------KSPIFGPEEVNSVEGNS-YYPPTSVNRHTRKY---QGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRGLGINSRGLSFDVS-SQGPGLLNDTKVYTVDLGRTVT-PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQA-----WQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW----LTNGDTLWR--------TTVEIKIIEGEPNLKVPGNVTAVL-----------------GETLKV------PCHF-------PCKFSSYEKYWCKW-------NNTGCQA--------------------------------------------LPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGVKQGHFYGETAAVYEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQDPR-------------------- |
9 | 1wjtA | 0.26 | 0.03 | 0.98 | 2.09 | HHsearch | | MGLEEELLRIAKKLEKMVSR-KKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHKEVVSLAKVLIKNWKRLLDSPRTTKGER-ESGPSSG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6e5oY | 0.11 | 0.10 | 3.59 | 1.60 | SPARKS-K | | -------EKRINKIRKKLSADSGPM------KTLLVRVMTDDLKKRLEMPQVIS-----NNAANNLRMLLDDYTKMKEAILQVYWQEFKDDHVGLMCKFAQPASKKIDQNKLKPEMDEKGYTNYFGRCNVAEHEKLIAQLKPVKDSDEAVTYSLGKFGQRALDFYSIHKESTHPVKPLAQI-------AGNRYASGPIIEHQKVVKGNQKRLESLRENLEYPSVTLPPQPHTK---EGVDAYNEVIARVRMWVNLNLWQKLDDAKPLL---RLKGFPSFPVVRRENEVDWWNTINEVKKLIDAKRDMGRVFWSGEKPNENDHKKRENPKKPAKRQFGDLLLYLEKKYWGKVFDERIDKKIAGLTSHIEREEARAEDAQSKAVLTDWLRFYACEIQLQKRGNPFAVEAENRGFSIGSDGHSIQYRYLENGKREGKKGRIRFTDGTDIKKSGKAKVIDPDDEQLIILPLAFIWNDLLSLETGLIKLANGREKTIYNKGRDEPALFVALTFERREVVDPSNIKP-----------------VNLIGVARGENIPAVIALTDPEGCP----LRIGEG---YKEKQRAIQAAKEVEQRR---AGGYSR------KFASKSRNLADDMVRNSARDLFYHAVTHDAVLVFANTERQYTKMEDWLTAKLAYEGLTSKTYLKTLAQYTSKTCSNCGFTITYADMDVMLVRL----------KKTSDGWATTLNNKELKAEYQITYYNRYKRQFLLKKRFSHR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|