Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCSSSSSSSSSSCCCCCCCCSCSSSSSCCCCCSSSSCCCCCCCCCCSSSSSSCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSSSCCCSSSSCCCSSSSSSSCCCCCCCCCSSSSSCCCCCSSSSSCCCCCCHHHCCCCCCSSSSSSSCHHHHCCCCCCCCCCCCCCCCCCCSSSSCCSSSCCCC GMTKEEMMIFIEASSENPCSLYSSVCYSPQAEKVYKLCSPPADLHKVGTVVTPDNDIYIAGGQVPLKNTKTNHSKTSKLQTAFRTVNCFYWFDAQQNTWFPKCVRAVVISNSLCVFMRETHLNERAKYVTYQYDLELDRWSLRQHISERVLWDLGRDFRCTVGKLYPSCLEESPWKPPTYLFSTDGTEEFELDGEMVALPPV |
1 | 5a10A | 0.11 | 0.09 | 3.42 | 1.17 | DEthreader | | AVAVGTKLYVFGGRNKQL-EFEDFYSYDTVKEEWKFLTKLGPEARTFHSMTSDENHVYVFGGVSK--GGL-N------A--TPFRFRTIEAYNIAEGKWAQLDRAFLVVQGKLWVFYGFATSQDYESNRVHCYDPATQKWTEVETTG-EKPSRRS--C-FAHAAIIIFGGEIETLSREGFALDTETVWERYEKP-------- |
2 | 4yy8A2 | 0.14 | 0.13 | 4.56 | 1.56 | SPARKS-K | | SAVLNNFLYVFGGNNYDYKALFETEVYDRLRDVWYVSSNLNIPRRNN-CGVTSNGRIYCIGGYDGSSHRMKAWVEVAPLNTPRERLNSIEVYEEKMNKWEQFSGAAFNYLNQIYVVGGIDN-EHNILDSVEQYQPFNKRWQFLNGVP-------EKKMNFGAATYIITGGENGEVLNSCHFFSPDTNEWQLGPSHSVLIANI |
3 | 3ii7A | 0.14 | 0.12 | 4.20 | 0.58 | MapAlign | | ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHG-MVEANGLIYVCGGSLG-------------NNVSGRVLNSCEVYDPATETWTELMHGLVFVKDKIFAVGGQNG--LGGLDNVEYYDIKLNEWKMVSPMPW-------KGVTVKCAAYVLAGFQGVGRLGHILEYNTETDKWVANSKVRA----- |
4 | 3ii7A | 0.15 | 0.13 | 4.52 | 0.62 | CEthreader | | ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVEANGLIYVCGGSLG-------------NNVSGRVLNSCEVYDPATETWTELCHGLVFVKDKIFAVGGQNG--LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVL--AGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTS |
5 | 3ii7A1 | 0.16 | 0.10 | 3.47 | 1.15 | MUSTER | | ---KHDYRIALFGGSQP----QSCRYFNPKDYSWTDIRCPFEKRRDA-ACVFWDNVVYILGGSQLF------------------PIKRMDCYNVVKDSWYSKLGKCAAVGSIVYVL--AGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTS------CLICVVDTC---------------------------------- |
6 | 4yy8A | 0.12 | 0.10 | 3.51 | 1.61 | HHsearch | | SAVLNNFLYVFGGNNYDYKALFETEVYDRLRDVWYVSSNLNIPRRNNC-GVTSNGRIYCIGGYDGSS-----------------IIPNVEAYDHRMKAWVEVSAMCVAFDNKIYVIGGTNG---ERLNSIEVYEEKMNKWEQFPALL-------EARSSGAAFQIYVVGGIDNNILDSVEQYQPFNKRWQFLNG----VPEK |
7 | 4ascA1 | 0.22 | 0.15 | 4.86 | 1.44 | FFAS-3D | | -MFLQDLIFMISE--------EGAVAYDPAANECYASLSSQVPKNHVSL-VTKENQVFVAGGLFYNEDNKEDP-----------MSAYFLQFDHLDSEWLGMPPGLGEALNSIYVVGGEIKDGERCLDSVMCYDRLSFKWGESDPLPYVV---GATFLPVRLNVLRLT---------------------------------- |
8 | 3ii7A | 0.15 | 0.13 | 4.34 | 0.67 | EigenThreader | | KRRDAYILGTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVEANGLIYVCGGSLGNN-------------VSGRVLNSCEVYDPATETWTLCPHGLVFVKDKIFAVGGQL----GGLDNVEYYDIKLNEWKMVSPMPWKG---VTVKCAAVGVYVGF----QGVGRLGHILEYETDKWVANSK---VRAFPV |
9 | 3ii7A | 0.16 | 0.14 | 4.62 | 2.44 | CNFpred | | ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-CSHGMVEANGLIYVCGGSLGNN--------------SGRVLNSCEVYDPATETWTELCHGLVFVKDKIFAVGGQNG--LGGLDNVEYYDIKLNEWKMVSPMPWKGV-------TVKCAAVYVLAGFQGGRLGHILEYNTETDKWVANS-KVRAFPVT |
10 | 3ii7A | 0.14 | 0.12 | 4.05 | 1.17 | DEthreader | | VCAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-CSHGMVEANGLIYVCGGSLG-------------NNVSGRVLNSCEVYDPATETWTEPMRHLVFVKDKIFAVGGQNGL--GGLDNVEYYDI-KLNEWKMVSPM-PW-KG--V-T-VKCAAVYVLAGFQGVGRLGILEYNTETKWVANVRA-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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