Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAAGPSQSPAPPLPEEDRMDLNPSFLGIALRSLLAIDLWLSKKLGVCAGESSSWGSVRPLMKLLEISGHGIPWLLGTLYCLCRSDSWAGREVLMNLLFALLLDLLLVALIKGLVRRRRPAHNQMDMFVTLSVDKYSFPSGHATRAALMSRFILNHLVLAIPLRVLVVLWAFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVDYCWLSPHNAPVLFLLWSQR |
1 | 1iduA | 0.12 | 0.08 | 2.86 | 1.00 | DEthreader | | -------------------------------------------------------------------------------------------AD--GLRSNADETAEYDDAVRVAIAMGGAQALNTKSPWQTAQGLYWAYDTPPRFYNQIVRRIAVKVNNADFARLFALVDVACTDAGIFSWKEKWEFEFWRPLSGVRWLTLGPFKPFPAYPSGHATFGGAVFQMVRRYYNGVGNIADSAWELMFENAISRIFLGVHWRFDAAGGVPLGIEIADEIFNNG-L---KP-TPPEIQPM |
2 | 1iduA | 0.10 | 0.10 | 3.72 | 1.45 | MapAlign | | ILFWNHVGLELNRVTHTVGGPLTGPPLSARALGMLH-LAIHDAYFSICPPTDFTTFLSPDTENAAYRLPSPNGANDARQAVAGAALKMLSSLYGEDVADVFFALAEYDDAVRVAIAMGGAQNSTKRSPWQTAQGLYWAYGTPPRFYNQIVRRIAVTYKNADFARLFALVDVACTDAGIFSWKEKWEFEFWRPLSGVWLTLGAPKPPFPAYPSGHATFGGAVFQMVRRYYDEPDNIFDSAWELMFENAISRIFLGVHWRFDAIGGVPLGIEIADEIFNNLKPTPPEIQP------- |
3 | 5jkiA | 0.23 | 0.15 | 4.66 | 1.69 | SPARKS-K | | ----------------------------------------------------------------------------------------MYKPVSLFLFFLILAAAIQSADEAISKAAVLIRQ-----PWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAP-----LVHESSFSFPSGHSMNAACVYPVIAYFLVKHKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR--------- |
4 | 4citA | 0.11 | 0.11 | 3.99 | 1.03 | CEthreader | | LSKRLIFSEDRMESLRDSLYMVWEGKNPVLFSDSKAYGLQVADHIGEWMNKDNYAQTRTMPKDPGRWQPTPPAYMDGIEPHWNKIRPAAQFKPVPPPAYSLEEDSAFYKELKEVYDVRNKITEEGDSSEEIQIARFWDKITPGAHWMGIAKIAARKTNSAKTLFAYTKASVAMADAFISCWDEKYRSNLIRPETVINQHIDLQTPPFPEYTSGHSVVSGAASVVLTEVFGDNFSSFKSFKQAADEAAISRMYGGIHYRAAIEVGVKQGRDLGTFVVNKLHMLSDKKV-------- |
5 | 5jkiA | 0.24 | 0.15 | 4.74 | 1.11 | MUSTER | | -------------------------------------------------------------------------------------------MYKP-LILAAAINAVQSADEAISKAAVLI-----RQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPL-----VHESSFSFPSGHSMNAACVYPVIAYFLVKKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR--------- |
6 | 5lpcA | 0.15 | 0.14 | 4.76 | 1.32 | EigenThreader | | HIANFTKGLPHDEHTGLLLNSADYDQFVLGIQSGDTTDFARTPLGPAELPKVHGCLSKQKIDCDDDHRSGFWDLEGPDAQAVTMPPAP----RLES--------PELTSEIAEVYSQALLRDIHFSQLRPRDLATYVHYDALYEAYLNACLILLGMGAPFDGPQILTLVCEAATRGLKAVRFQKFNVHRRLRNYFLPMAFPEGSPMHPSYGAGHATVAGACVTMLKAFF--DHGWEGELNKIAANISIGRDWAGVHYFTDYIESLRLGEKIAIGILEEQKLTYQI---------- |
7 | 5jkiA | 0.24 | 0.15 | 4.75 | 3.86 | HHsearch | | -----------------------------------------------------------------------------------------MYKPVSLFFLIIHTNAVQSADEAISKAAVL-----IRQPWLNEVMTGITHLGASSFLLPLIVIGAGMFFYR-KTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAP-----LVHESSFSFPSGHSMNAACVYPVIAYFLVKKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR--------- |
8 | 4citA | 0.12 | 0.11 | 3.75 | 1.39 | MapAlign | | AAYEIVAATNDNYNSLAGQLNGLTAIPEPDTTKTINYELAAVV-------------AHMELSKRLIFSEDRMESLRDSLYMVWEGKNPVLFSDSKAYGLQVADHIAFYKELKEVYDVRNKITEEGDSSEEIQIARFWDITP-GAHWMGIAKIAARKSDFAKTLFAYTKASVAMADAFISCWDEKYRSNLIRPETVISWKPVLQTPPFPEYTSGHSVVSGAASVVLTEVDGLPIRSFKSFKQAADEAAISRMYGGIHYRAAIEVGVKQGRDLGTFVVNKLHML------------- |
9 | 5jkiA | 0.26 | 0.16 | 4.91 | 1.70 | FFAS-3D | | -------------------------------------------------------------------------------------------VSLFLFFLILAANAVQSADEAISKAAV-----LIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAP-----LVHESSFSFPSGHSMNAACVYPVIAYFLVKHLPVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFD---------------- |
10 | 1iduA | 0.12 | 0.11 | 3.75 | 1.27 | EigenThreader | | RLPSPNGANDKPVEQPNPNPGANISDNAYAQLGLVLDRSVLEAPGGVDRESASQEGYNPTPGRYKFDDEPTHPVQSEHFLADPPGLRS----NADE-------TAEYDDAVRVAIAMGGAQALNSTKRS--PWQTAQGLYWAYDFYNQIVRRIAVTYKKADFARLFALVDVACTDAGIFSWKEKWEFELTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGS---AWELMFENAISRIFLGVHWRFDAAGGVPLGIEIADEIFNNGLKPTM----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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