Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
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| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCHHHHHHCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCSSCC MEMAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAEEEEARRRQSEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKDFQKGFSSTDGAVYAMEINVEKDKQTGETKILSTSTIGPEGVHQKGVKVYDDGTKVVYEVRSGGTVVENGVHKLSTKDVEELIQKAGQSSLGGGHVSERTVIADGSLSHPKEHMLCKEAKLEMVHKSRKDHSSGNPGQQAQAPSAAGPEANLDQPVTMIFMGYQNIEDEEETKKVLGYDETIKAELVLIDEDDEKSLREKTVTDVSTIDGNAAELVSGRPVSDTTEPSSPEGKEESLATEPAPGTQKKKRCQCCVVM |
1 | 6tpiA | 0.10 | 0.06 | 2.27 | 0.57 | CEthreader | | TREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR--------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 4fgvA | 0.04 | 0.04 | 1.84 | 0.68 | EigenThreader | | ILHEPDTIKIIGNIMKTNVSACSSIGPYFFPQIGRLYNDMLQMYAATSQLISEAVARDG----EIATKMPKVRGLRTIKKEILKLVETFVEKADYNRNVPGARDAEVLKAMTVIITRLQGLMEAINLYCFPALLKL-------------------DNRQFKFVIDSCMW-----------ASKHDNRDVETAGLNMCLELINNIAEKTFNQFFIRILQDVFFVLTDTDHKAGFKTQSMLLMRLFYFVHPADGSAPKI----QGPIYQPDQAQPGTGA------NLTPLQITTFVKDCFELN------------TQYDKFRVVLRDFLISLREFAGDNAELYQVEKEQQEREARAADLERRSKVGGLLKPSELEDEEL-- |
3 | 2tmaA1 | 0.15 | 0.05 | 1.79 | 0.67 | FFAS-3D | | ---LDKENALDRAEQAEADKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALK----DAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 6yvuB | 0.11 | 0.11 | 3.80 | 0.96 | SPARKS-K | | DLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLEIIRHEKELEPWDLQLQEKESQIELSLLEETQAKLKKLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTQKVLNAHRQRAMESRLQKSGRINGFHGRLGDLGVIDDTVECAQHCIDYLRKNKLGARFILLDRLRQFNLQPISTPENVPRL----FDLVKPKNPKFSNAFYSVLRDT----LVAQKQANNVAYGKKRFRVVTVDGK---------LIDISGTMSGGGNHVAKGLMKLKVDDYTPEEVDKIER |
5 | 2tmaA | 0.19 | 0.06 | 1.97 | 0.67 | CNFpred | | EAEKAADESERGMKVIESRQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKL----VIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 1ciiA | 0.13 | 0.07 | 2.46 | 0.67 | DEthreader | | LDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALAEEVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKVSAKAQLA---------------------------------TYEKYRADINKK-----DRAAIALGAVTENWRPLFVKTETI--------------------------------------------------------------IAGNAAALVLVSILTGS---------------LMAVTG--------------------------------------------------------------ALIDEL |
7 | 6tpiA | 0.09 | 0.06 | 2.14 | 1.00 | MapAlign | | KQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQRQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESESEKSLMSRTGGLGFWPVRGPTLHRYGEQLQGELRWKGMVIGAKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSA----------------------------------------------------------------LVSVGSQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR---------------------------------------------------------------------- |
8 | 3tnfB | 0.13 | 0.12 | 4.14 | 0.85 | MUSTER | | -----LDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGFE-LTDSEELSLSEINEKMEAFSKDSEKLTQLMEKHEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQK-------------DYSQSKHDLATIKMEALIHKLSEMEKQLETINNLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEEVTSLNDAHYVIGKDQQLFNLGGKFYPIHKEQKILEKKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTKGLETTIHKERVEETKQQLEDNGKEK-------IE |
9 | 3jbhA | 0.14 | 0.12 | 3.97 | 0.78 | HHsearch | | TYLNDAVLLKPHLFAISDGAYSAM-LANRENQTENTKYQLMSGGIENLKADLLLSDDIYDGPGVDDA--EELRLTDTASHEYKTDVYKITASCMHLGEMKFKQRPRTEEVAHLLGV---NAADLYKNLVKPGKAMFDWRLNE----------TLDTK-----QKRQYFIG--------VLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVEGIVFIDFGLDL---AACIELIEK----------PMGILSILEEES------MFPKAT-----DKSFQDNHLGKSPNFVKPKPPKPGQQEAHFSIAHYAGTVGWLEK-NKDP--VNDTVVDQFKKNIFEDHPGLGA-E----EKGGGGKGGGGRKKGASFQTVS |
10 | 2bklB | 0.09 | 0.09 | 3.35 | 0.52 | CEthreader | | EALAARFKELFYTDSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFRQIYKTSVSTGKSELWAKVDVPMNPEQYQVEQVFYASKDGTKVPMFVVHRKDLKRDGN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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