>Q8IXB1 (124 residues) QVSTDLTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQ AYAQTCQKAGIRAYPTVKFYFYERAKRNFQEEQINTRDAKAIAALISEKLETLRNQGKRN KDEL |
Sequence |
20 40 60 80 100 120 | | | | | | QVSTDLTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQAYAQTCQKAGIRAYPTVKFYFYERAKRNFQEEQINTRDAKAIAALISEKLETLRNQGKRNKDEL |
Prediction | CSSSSSCHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCHHHHHHCCCCCCCSSSSSSCCCSCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCC |
Confidence | 9499926434799996089958999968988467626489999999937981899975888856778719977877999729913455300036887799999999997112332035554579 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | QVSTDLTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQAYAQTCQKAGIRAYPTVKFYFYERAKRNFQEEQINTRDAKAIAALISEKLETLRNQGKRNKDEL |
Prediction | 8331503574056303757410000020420330442223144007616540300202045157207626032100010035465466345635452427402510473165347625654668 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CSSSSSCHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCHHHHHHCCCCCCCSSSSSSCCCSCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCC QVSTDLTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQAYAQTCQKAGIRAYPTVKFYFYERAKRNFQEEQINTRDAKAIAALISEKLETLRNQGKRNKDEL | |||||||||||||||||||
1 | 6esxA | 0.24 | 0.22 | 6.77 | 1.33 | DEthreader | -STVAVTDATFEADVLKSSKPVLVDFWAEWCGPCKQIAPALEQLSEELADVVTIAKVNIEDSPTTPSRYGVRGIPTMMLFRDGQMTSMKVG---A-MPKQKILEWLNEAGVQAALE-------- | |||||||||||||
2 | 3apoA7 | 0.81 | 0.73 | 20.72 | 1.73 | SPARKS-K | QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET------------ | |||||||||||||
3 | 1dbyA | 0.25 | 0.22 | 6.73 | 0.55 | MapAlign | MEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETII----GAVPKATIVQTVEKYL-------------- | |||||||||||||
4 | 1dbyA | 0.25 | 0.22 | 6.74 | 0.36 | CEthreader | MEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIG----AVPKATIVQTVEKYLN------------- | |||||||||||||
5 | 3apoA7 | 0.81 | 0.73 | 20.72 | 1.72 | MUSTER | QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET------------ | |||||||||||||
6 | 3apoA | 0.79 | 0.69 | 19.38 | 0.96 | HHsearch | QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAWEEQINS----RDAKTIAALIYGKLET------------ | |||||||||||||
7 | 3apoA7 | 0.81 | 0.73 | 20.72 | 2.07 | FFAS-3D | QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET------------ | |||||||||||||
8 | 6yt3B | 0.23 | 0.23 | 7.06 | 0.68 | EigenThreader | DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG----ALSKGQLKEFLDANLVADQNAAMLGQLLA | |||||||||||||
9 | 3apsA | 0.83 | 0.76 | 21.38 | 1.56 | CNFpred | QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL----------- | |||||||||||||
10 | 3dxbD | 0.24 | 0.22 | 6.80 | 1.33 | DEthreader | DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG--A--LSKGQLKEFLDANLAG-AM-S-EVY--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |