>Q8IXB1 (101 residues) TTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRRASNLLYGQLKFGTLDCTVHEGLC NMYNIQAYPTTVVFNQSNIHEYEGHHSAEQILEFIEDLMNP |
Sequence |
20 40 60 80 100 | | | | | TTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRRASNLLYGQLKFGTLDCTVHEGLCNMYNIQAYPTTVVFNQSNIHEYEGHHSAEQILEFIEDLMNP |
Prediction | CSSCHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCHHHHHHCCCCCCCSSSSSSCCSSSSSSCCCCHHHHHHHHHHHHCC |
Confidence | 94051234433898289999689985787253999999999559838999868878667887199867779997199288864898999999999996198 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | TTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRRASNLLYGQLKFGTLDCTVHEGLCNMYNIQAYPTTVVFNQSNIHEYEGHHSAEQILEFIEDLMNP |
Prediction | 76145740566574200010204203304422331450076167503002020451572076260422000200474425626452527402510573478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CSSCHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCHHHHHHCCCCCCCSSSSSSCCSSSSSSCCCCHHHHHHHHHHHHCC TTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRRASNLLYGQLKFGTLDCTVHEGLCNMYNIQAYPTTVVFNQSNIHEYEGHHSAEQILEFIEDLMNP | |||||||||||||||||||
1 | 2pukC | 0.22 | 0.22 | 6.87 | 1.50 | DEthreader | QDVNDSSWKEESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERESIIGAVPKSTLTDSIEKYLS- | |||||||||||||
2 | 3apoA6 | 0.91 | 0.91 | 25.59 | 2.05 | SPARKS-K | TTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNP | |||||||||||||
3 | 2pptA | 0.28 | 0.28 | 8.47 | 0.53 | MapAlign | AGIDPAILARADDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGREARAAGARPASELVGFVRGKL-- | |||||||||||||
4 | 2pptA | 0.28 | 0.28 | 8.48 | 0.34 | CEthreader | AGIDPAILAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGELARAAGARPASELVGFVRGKLG- | |||||||||||||
5 | 3apoA6 | 0.91 | 0.91 | 25.59 | 1.95 | MUSTER | TTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNP | |||||||||||||
6 | 6yt3B | 0.27 | 0.27 | 8.22 | 0.90 | HHsearch | IHLTDDSFDTDLDGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVATKVGALSKGQLKEFLDANLEE | |||||||||||||
7 | 3apoA6 | 0.91 | 0.91 | 25.59 | 2.15 | FFAS-3D | TTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNP | |||||||||||||
8 | 2nbsA | 0.14 | 0.14 | 4.72 | 0.63 | EigenThreader | VIKSLEELREATNRISVIVFTHPDSKRSKEIKEKLKKLAEEF-PDVDIYLVDTSTNPEAREWYNITSVPTFVIEKGGELGEVKGPDIDK-LRETLDELLAR | |||||||||||||
9 | 3apoA | 0.91 | 0.91 | 25.59 | 1.51 | CNFpred | TTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNP | |||||||||||||
10 | 3gnjA | 0.17 | 0.17 | 5.52 | 1.50 | DEthreader | EKLDTNTFEQLEGKACLV-FSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYKGKAGDVEDDEVEQ-IADVLED | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |