>Q8IXB1 (111 residues) VTELWTGNFVNSIQTAFAAGIGWLITFCSKGGDCLTSQTRLRLSGMLDGLVNVGWMDCAT QDNLCKSLDITTSTTAYFPPGATLNNKEKNSILFLNSLDAKEIYLEVIHNL |
Sequence |
20 40 60 80 100 | | | | | VTELWTGNFVNSIQTAFAAGIGWLITFCSKGGDCLTSQTRLRLSGMLDGLVNVGWMDCATQDNLCKSLDITTSTTAYFPPGATLNNKEKNSILFLNSLDAKEIYLEVIHNL |
Prediction | CCSCCHHHHHHHHHHHHCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHCCCSSSSSSCCCCHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCSSSSCCCCHHHHHHHHHHHC |
Confidence | 942320018988877541699679999579999899416999999982662578984687567898629877866996571113567777434315689999999999739 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | VTELWTGNFVNSIQTAFAAGIGWLITFCSKGGDCLTSQTRLRLSGMLDGLVNVGWMDCATQDNLCKSLDITTSTTAYFPPGATLNNKEKNSILFLNSLDAKEIYLEVIHNL |
Prediction | 744136541352155433562200000027554114773343013204411421303065456105515356432120334642567655333426424144004302755 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCSCCHHHHHHHHHHHHCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHCCCSSSSSSCCCCHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCSSSSCCCCHHHHHHHHHHHC VTELWTGNFVNSIQTAFAAGIGWLITFCSKGGDCLTSQTRLRLSGMLDGLVNVGWMDCATQDNLCKSLDITTSTTAYFPPGATLNNKEKNSILFLNSLDAKEIYLEVIHNL | |||||||||||||||||||
1 | 6x0bA | 0.09 | 0.08 | 3.11 | 1.33 | DEthreader | VIAFHSNRWQLHFNSSKQLNKLIVVDFAATWCGCKMEPVINAMSAKYT-DVDFVKIDVDELSDVAQEFGVQMPTFLLLKQ-G------KEVERVVGAKK-DELEKKILKHE | |||||||||||||
2 | 3apoA4 | 0.85 | 0.81 | 22.85 | 1.76 | SPARKS-K | VTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLT-----TAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNL | |||||||||||||
3 | 5nykA | 0.12 | 0.11 | 3.85 | 0.50 | MapAlign | MEPIDDSHHLDKILLQARLSQPIIIDWMASWCKCILKPKLEKLAAEYDTKIKFYCADVNKVQALVKRGNIKMPTIQLWKDG-------EMKAEVIGGV-IEEVREMIQKFV | |||||||||||||
4 | 2pptA | 0.16 | 0.14 | 4.79 | 0.36 | CEthreader | VAGID----PAILARAERDDLPLLVDFWAPWCPCRQAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQIPAFILFHKGR-------ELARAAGARPASELVGFVRGKL | |||||||||||||
5 | 3apoA4 | 0.85 | 0.81 | 22.85 | 1.75 | MUSTER | VTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLT-----TAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNL | |||||||||||||
6 | 3apoA | 0.20 | 0.19 | 6.05 | 1.07 | HHsearch | SIDLTPQ-TFNEKV--LQGKTHWVVDFYAPWSPSQNAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAPSVKLYQYER--A-KKSIWEEQINSRDAKTIAALIYGKL | |||||||||||||
7 | 3apoA4 | 0.75 | 0.71 | 20.17 | 1.84 | FFAS-3D | VTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLTTAYFPPGATLNDR-----EKSSVLFLNSLDAKEIYMEIIHNL | |||||||||||||
8 | 2dj0A | 0.11 | 0.10 | 3.59 | 0.63 | EigenThreader | IKYFNDKTIDEELERDK--RVTWIVEFFANWSNDCQAPIYADLSLKYNCGLNFGKVDVGRYTDVSTRYKVQLPTLILFQGGK-------EAMRRPQIFSEENVIREFNELS | |||||||||||||
9 | 5aykA | 0.86 | 0.84 | 23.59 | 1.45 | CNFpred | VTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLD---STTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNL | |||||||||||||
10 | 6esxA | 0.11 | 0.10 | 3.59 | 1.33 | DEthreader | TVAVTDATFEADVLKS--S-KPVLVDFWAEWCGCKQAPALEQLSEELADVVTIAKVNIEDSPTTPSRYGVGIPTMMLFRD--GQ----MT-SMKVGAMPKQKILEWLNEAG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |