>Q8IXB1 (123 residues) SWNYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAK EVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYHGDRSKESLVSFAMQHV RST |
Sequence |
20 40 60 80 100 120 | | | | | | SWNYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYHGDRSKESLVSFAMQHVRST |
Prediction | CCCCCCCCCCCCCCCCCSSSCCHHHHHHHHHCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCHHHHHHCCCCCCCSSSSSCCCCSSSSSCCCCCHHHHHHHHHHHCCCC |
Confidence | 975312567888999981992733499998449918999959988577754289999999846985799986888877898809975777999729961046518989999999999865899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | SWNYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYHGDRSKESLVSFAMQHVRST |
Prediction | 735224564323677640250357305521776410001010320330452333045007616650300202045257207627042100010036464366253624273025104742778 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCSSSCCHHHHHHHHHCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCHHHHHHCCCCCCCSSSSSCCCCSSSSSCCCCCHHHHHHHHHHHCCCC SWNYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAPVKYHGDRSKESLVSFAMQHVRST | |||||||||||||||||||
1 | 3ed3A | 0.37 | 0.34 | 10.15 | 1.33 | DEthreader | ---H-----NFYDSDPHISELTPKSFDKAHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKALCAKYDVNGFPTLMVFRPAHANEVYSGARTLAPIVDFSLSRI-RS | |||||||||||||
2 | 4xhmA | 0.22 | 0.20 | 6.16 | 1.87 | SPARKS-K | ----------ARKVLDSPVKLNSSNFDETLKNNENVVVDFWAEWCHPCKMIAPVIEELAKEYAGKVVFGKLNTDENPTIAARYGISAIPTLIFFKKGKPVDQLVGAMPKSELKRWVQRNL--- | |||||||||||||
3 | 2pptA | 0.18 | 0.15 | 5.04 | 0.55 | MapAlign | -------------ITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKL--- | |||||||||||||
4 | 2pptA | 0.17 | 0.16 | 5.37 | 0.34 | CEthreader | AAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLG-- | |||||||||||||
5 | 3dxbD | 0.24 | 0.22 | 6.85 | 1.44 | MUSTER | ----------HHPMSDKIIHLTDDSFDTDVLKDGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS | |||||||||||||
6 | 3f8uA | 0.28 | 0.24 | 7.46 | 0.90 | HHsearch | ---------------SDVLELTDDNFESRISDTGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPA | |||||||||||||
7 | 2dmlA | 0.34 | 0.32 | 9.49 | 2.07 | FFAS-3D | ---------GLYSSSDDVIELTPSNFNREVQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANNKPEDYQGGRTGEAIVDAALSALRSG | |||||||||||||
8 | 6ckpA | 0.22 | 0.21 | 6.67 | 0.67 | EigenThreader | GTLEAQTQGPGSM---ATVKVDNSNFQSDVLQSEPVVVDFWAEWCGPCKTIAPALDEIAAEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWIKASAA-- | |||||||||||||
9 | 3apqA | 0.96 | 0.96 | 26.90 | 1.67 | CNFpred | SWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRST | |||||||||||||
10 | 3ed3A1 | 0.37 | 0.34 | 10.14 | 1.33 | DEthreader | ---H-----NFYDSDPHISELTPKSFDKAHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKALCAKYDVNGFPTLMVFRPAHANEVYSGARTLAPIVDFSLSRI--R | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |