Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC DGLLEEHKEFLKKFSVTIDAIPDHHPGEEIFNFLNSGKIFNQYTLDLRDSGFIGQSAVEKLILKSGKTDQIFLTTQGFLTSAYHYVQCPVPVLKWLFRMMSVHTDCIVSVQILSTLMEITIRNDTFSDSPVWPWIPSLSDVAAVFFNMGIDFRSLFPLENLQPDFNEDYLVSETQTTSRGKESEDSSYKPIFSTLPETN |
1 | 6y8fA | 0.07 | 0.07 | 2.76 | 0.51 | CEthreader | | LTNDQQYKEVADLLWEETKQGWSDVHGGGIAWKTDTPNSKNACSNGPAAIFALDQDEEDLEWAKKIYHWLKDTLVDPESGLVWDNTYNVGTYIGAANLLHQATGEGMYLDDAIKSASSVVPGELTTGGVLKNEGQGDGGLFKGILVRYFTQLALNPDLPDGKRNEFEEFVLFNAETLYHNGLTSAGLAGPNWNDEPSGR |
2 | 5furI2 | 0.06 | 0.06 | 2.58 | 0.68 | EigenThreader | | NRISMEFMLQVFNKL---LSLASRNKKKKIPLMNGEEVDMDLADFMWQYQLRYERDVVAQQESILALEKFVRMSACFCLAKIANSMVSTWTGPPAMKSLFTRMFCYFLQKTMPVAMALLRDVH-------NLCPKEVLTFILDLIKYNDNRKAEMSVTPAVSVNNEVVRLILEEITRFLNMEKLLPSYRHTIIRVLQKN |
3 | 3a5aA | 0.10 | 0.07 | 2.44 | 0.59 | FFAS-3D | | -GLSDSEEKLVRDIHGDLQGT-----ANTVFY-----NYLKKYPSNQDKFETLKGHPLDEV-KDTANFKLIAGRIFTIFDNCVKNVGNDKGFQKVIADMSGPHVARPITHGSYNDLRGVIYDSMHLDSTHGAAWNKMMDNFFYVFYE---------------------------------------------------- |
4 | 5cwjA | 0.10 | 0.08 | 2.94 | 0.67 | SPARKS-K | | --DSEEEQERIRRILARKSG---------------------------TEESLRAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGSE---------EALRQAIRAVAEIAAQDPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQ-------- |
5 | 4gmxC | 0.14 | 0.11 | 3.58 | 0.67 | CNFpred | | --LGHIYYNMLQLYRAVSSMISAQAEGLIATKTPKVR--------GLRTIKKEILKLVETYISKANLDDVVKVLVEPLLNAVLEDYMRDAEVLNCMTTVVEKVMIPQGVILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEK--SFAAFLEL----------------------------------------- |
6 | 6tntA | 0.05 | 0.05 | 2.06 | 0.83 | DEthreader | | LSEDL-RVQDVRRLLQSAPRGFTLFS-------------M--LKTNNIADWLRAPDT-T--RCLWDDI-LPNSKWVDSNVQIRENSSHVYIIAGACLSLGFRFSENLSAFNCLHKFAKDFMTYLSAPNASVTGNLTCLSVVLLSLAMVMAGGVLLCRFHMKFHLAHMLGLLGHLYVLAA--E-R--TYGWYE------- |
7 | 1rw9A1 | 0.06 | 0.05 | 1.93 | 0.68 | MapAlign | | --GDPDFAKAITAL--------------NNKAADSLAKLDVKKGRTSVFTDLSLAKDAEMVTTYLIKAGLADANTLCYNDWSWE-----IGVPRALADAMVAELSAAERTAYCAAIDHFPWLQFPPKRGKITSNRVDLCQGIIIRSLA-GEDPTK-----------LNHAVAGL------------------------- |
8 | 2dc3A | 0.11 | 0.09 | 3.28 | 0.48 | MUSTER | | EELSEAERKAVQAM----ARLYANCE----VGVAILVRFFFPSAKQYSQFKHMED---PLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHVEPVYFKILSGVILEVVAEEFASD--FPPETQRAWAKLRGLIY--------SHVTAAYKEVGWVQQVPNATTPPATLPSS------------ |
9 | 2pffB | 0.15 | 0.14 | 4.77 | 0.95 | HHsearch | | DDYFEELRDLYQTYHVLVGDLIKFSAETLSETTLDAEKVFTQG-LNILEWLENPSNTPDDYLLSIPISCPLIGVIQLAHYVVTAKLGFTPGELRSIAETDSWESFFVSVRKAITVLFFIGVRCYEA--YPNTSLPPSILEDSLE-NNEGVPSPML-SISNLTQEQVQ-DYVNKVEISLVNGAKAKAPSGLDQSRIPEYD |
10 | 3s8mA | 0.04 | 0.04 | 2.09 | 0.46 | CEthreader | | AQVIELIKTEGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVGGQDWELWIRSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVLKSVVTQASAAIPVPLYISVYKIKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQNRLRLDD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|