Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSCCCCCCC MTRRCMPARPGFPSSPAPGIISKLLDEKHEDVPNASNLQVSVLHRYLVQMKPSDLLKKMVLKKKAEQPDGIIDDSLHLELEKQAYYLTYILLHLVGEVSCSHSFSSGQRKHFVLLCGALEKHVKCDIREDARLFYRTKVKDLVARIHGKWQEIIQNCRPTQGQLHDFWVPDS |
1 | 5yfpB | 0.05 | 0.05 | 2.16 | 1.00 | DEthreader | | ---------DKSQGCVETQNKDSGSPLDYGFIP----PNCN-GLSCLRYLP--KIVEPILKFSTELALITGICRNTLSTIINRCVGAISSTKLRDISNFYQ-LENQEVTFPEIVTSFQEVSIKTTRDLLFASVSYPSKQLLTGIEIQQIISMEAVLEINANLTLNLYFECAP |
2 | 3ljbA | 0.08 | 0.08 | 3.20 | 0.48 | CEthreader | | DENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFETFETIVKQQIKALEEPAVDMLHTVTDMVAKSKIEDIRAEQEREGEKLIRLHFQMEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQD |
3 | 5zi1A1 | 0.10 | 0.09 | 3.27 | 0.67 | EigenThreader | | LLWPNKQNDLWESFMNEVEALIN------QEITEAVVSKALSELEGLALEGYTSALEAWQN---------NRSDKLKQLLVYERFVSTENLFKFAMPSFRSVGFEGPLLTVYAQAANLHLFLLKNAELFGAEWGMQQYEIDLFYNEQKGYVEEYTDHCVKWYKEGLNKLKNA |
4 | 4f7rA1 | 0.11 | 0.09 | 3.16 | 0.72 | FFAS-3D | | -------------TREDYVFMAQLNENAEGELSDKERNLLSVAYKNVIGPRRAAWRIVSSIEAKEKGRQKPNAKRIEQKIEKELSDICNDILKLLQEQFVPRSTNADAKVFYYKMQGDYYRYL-AEYSSGED---KEKIAGSALNAYNSAFEISQQ---------------- |
5 | 6w2wA | 0.10 | 0.09 | 3.47 | 0.62 | SPARKS-K | | DKEEVIEIVKELAELVVAEIVYQLAEEHST-DPELIKEILQEALRLAEEQKAARLLEEARQLLSKDPE-----NEAAKECLKAVRAALEAALLALLLLAKHPGS--QAAQDAVQLATAALRAVEALAKQYPNSDIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKE |
6 | 1z3hA | 0.07 | 0.06 | 2.35 | 0.64 | CNFpred | | -----------VTNKGVLTVAHSIFKRWRPLFR--SDELFLEIKLVLDVFT-APFLNLLKTVDEQITANE-----NNKASLNILFDVLLVLIKLYYDFNCQD-IPEFFEDNIQVGMGIFHKYLSYSNPLLEDP--ASVLIKVKSSIQELVQLYTTRY--------------- |
7 | 5yfpE | 0.08 | 0.07 | 2.73 | 1.00 | DEthreader | | ------------------------LEAIVDSKVNYDKEIPNSPANYSLNVDMLKCVVESTARVME--LIPNKAHLYILEILKIMFLGIVDYMEEVAYWKICKGVVNLNFLKFISMSTEILDLLSISKFLPLNIAQIIETNSQIQKMEILINIILQETTVTKILLIFSSKKGL |
8 | 5z2cA | 0.06 | 0.06 | 2.51 | 0.71 | MapAlign | | ------KVLVQSVCIQIRGQILQKLGMWAAELQPDKKGLSTSLGILADIFVLLSAAEACKLAAAFSAYTPLFVLTAVNIRGTCLLSYLHSFVKAAFGLTHRRLHGEGTVHAASQLCKEAMGKL----YNFSTSSRSQDREALSQEVMSVIAQVKEHLQVQSFSNVDDRSYV- |
9 | 4kf7A | 0.07 | 0.07 | 2.87 | 0.53 | MUSTER | | LLHSRAPGTGVELDPLRNAVLQGAFGFDQNAAKPDTTQLDALAPTYIRTL--EGCFDRMQMAPESL-DNQMLTEQFEVDWIRTALTEAIHAMSLIFQILDLKAAAPALVTQWFALMDTCEFFEPVPRGHELIAELLMPLHSLVAAISLKLLNVDRTLSYLDQDVDLLEEEEP |
10 | 2pffB | 0.14 | 0.14 | 4.73 | 0.87 | HHsearch | | ENPSCPLGVIQLAHYVVLVTAVAIAET-DSWESFVSVLFFIGVRCYPNTSLPPSILEDSLENNEGVPSPMLS--ISNLTQEQVQDYVNKTNSHLVNGAKNL--VVSGPPQSLYGLNLTLRKAAPSGLDQSRIPFSERKLSDLINKDLVKNNVSFNA-KDIQIPVYDTFDGSD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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