Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCSSSSCCCCCSSSSSCCCCCCSCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCSSSSSSSSCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCSSSCCCCCCCCCCCCCCSSSSSCCHHHHCCCSSSSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCC TKPLTFADCISDELPLGWEEAYDPQVGDYFIDHNTKTTQIEDPRVQWRREQEHMLKDYLVVASMTSLSPRSSLSSPSPPCSPLMADPLLAGDAFLNSLEFEDPELSATLCELSLGNSAQERYRLEEPGTEGKQLGQAVNTAQGCGLKVACVSAAVSDESVAGDSGVYEASVQRLGASEAAAFDSDESEAVGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGER |
1 | 2z0uA | 0.99 | 0.38 | 10.61 | 1.22 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSS-YPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGER |
2 | 2z0uA | 1.00 | 0.39 | 10.78 | 2.12 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGER |
3 | 2z0uA | 1.00 | 0.38 | 10.69 | 1.54 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVS-SYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGER |
4 | 3hn8A | 0.10 | 0.08 | 2.97 | 0.56 | CEthreader | | ----------------------------------------------------------------GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPILEGGSEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLIS-EGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGRE |
5 | 4p42A | 0.08 | 0.06 | 2.46 | 0.77 | EigenThreader | | RAEWLNKTVKHMWPFICQFIEKLFRETTKVDVGQQPLRINGVKVYT-----------------------------ENVDKRQPLIGDMPLVGFFLRKPNGLSDTIILDIISNYLVLPN---------------RITVPLVSEVQIAQLRFPQDLQGKDTYLKGLVKGKSIKENLSPED----PDKDDTLDEVPKGKLHLTLMPNSSALLILYLDSARN--LPSSSNPNPVVQMSVGH------KAQESKIRYKTNEPVWEENFTFFIHN--PKRQDLEVEVRDEQ---HQCSLGNLKVPLSQLLTSEDM |
6 | 2dmgA | 0.21 | 0.08 | 2.67 | 1.00 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSGSPLGQIQLTIRHSSQRNKLIVVVHACRNLIA-FSEDGSDPYVRMYLLPDKRRSG-RRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGSKDKGLLGKVLVALASEELAKG- |
7 | 2cm6A | 0.18 | 0.07 | 2.42 | 0.96 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MALYEEEQVERIEERG--KILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKP--KKAK--HKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISALKNKDKK |
8 | 6fd0A | 0.98 | 0.38 | 10.61 | 2.10 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSIAYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGER |
9 | 7cunG | 0.09 | 0.06 | 2.36 | 0.83 | DEthreader | | -SAQDAARILCHCLAAIALGDGMLGDLMEL--------YKVIGRLLSLATIFIAQASRNHFSYGIALTA-STPLSFQEFVKIDLLQAFSQLIC-----------------------------------------------------LASRYGD------------LYQASFTLRELHADQRYFFQ-K--LQSTSIKLALPSIAVQQLALKVEGVVQHPGFRKI---QSVCLNVSSTLKIPINMTNEMEQRVEP-HNDYF-STQFLLNFAILGTHNITVESSVKDA-N-GIVWKTGPRTTIF-V------ |
10 | 2r83A | 0.10 | 0.08 | 2.97 | 0.76 | MapAlign | | ------------------------------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNG-KRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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