Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCSHHHHHCCCCCCSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITFLSEITLIWFSEASLSVYQSLSNSLHKVKNILCHIFYLLKEFVWKIVSH |
1 | 3qweA | 0.09 | 0.08 | 2.94 | 0.52 | CEthreader | | -----GEELDLRLIRTKGGVDAALEYAKTWSRYAKELLAWTEKRASYELEFAKSTMKIAEAGKTLFLEHDLSLGTLAMETVAQQKRDYYQPLA-------AKRTEIEKWRKEFKEQWMK---------------EQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSKQQERRRRSREEAQAKAQEAEALYQACVREANARQQDLEIAKQRIVSHVRKLVFQG |
2 | 3i2wB | 0.04 | 0.03 | 1.68 | 0.62 | EigenThreader | | NY----------KRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKG--PEYGTTEAAWKGVLTESERISDVHKIKDNLCNDVNSQIKTWQKENY-------------------------HHTLQIKERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACKTERSATNQERNRVQKTKDQVQKCREKYEQAIAEITKYNSVYIEDTSV |
3 | 6j72A2 | 0.08 | 0.08 | 2.99 | 0.84 | FFAS-3D | | DPGERERLTAELERRKQEAQQVLSDGIADLTADVDHDLRHRFRIIAAHTEKVIDWAEIGAELEDAVATAVGDNFVWAYQRAEALAAE------------VARTFTEAGLDAVQMPQIDFNPLSLGAGFVLGRKAYKEDMENRMLRVRNEAKANVRKFVDDVAFVVGKESRDRLKGIQRQLRDHYREIANQTTRSLNESLQAAIAAAKTRVKELERQQNIL--- |
4 | 6w2vA | 0.15 | 0.13 | 4.51 | 0.87 | SPARKS-K | | DKEEVIEIVKELAELAKQSPNLVAEVVRALTEVAKTSTDT-----ELIREIIKVLLELASKL--RDPQAVLEALQAVAELARELAEKTG-----DPIAKECAEAVSAAAEVKKAADLLKRH----------------PGSEAAQAALELAKAAAEAVLIACLLALDYPKSDIAKKCIKAASEAAEEASKAAEEAQRQKARDEIKEASQKAEEVKERCERAQEH |
5 | 5gheA | 0.09 | 0.09 | 3.24 | 0.73 | CNFpred | | AIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGDKLEGVINIQKRLKEVQTALNQAHGESSPAHKELLEKVKNLKTTLERTIKAEQD-EYSFLLGPLLGFVVYEILENTAVQHIKNQIDEIKKQLD------------QHDLDRDVKIIGMLNSINTDIDNLYSQGQEAIKVFQKLQGIWIGAQIENLRTTSLQEVQDSDDEIQIELEDASDAWLVVAQE |
6 | 6lr0U | 0.09 | 0.07 | 2.59 | 0.83 | DEthreader | | -LFRFSSTDIWLMFVGSLCAFLHGIAQPGVLLIFGTMTDVFIDYDVELQELQ--IPGKA----------CVNN-TIVWTRCGLLNIESEMIASYAIAVVLFLLSGATQTRMLTGFASRKP-------PSRPDSQVLN--VGSSGCGKSI--VSQEP--V--LF-ACSI-MDNIKYGDNARAI-PILLLDECIVIIIAVMGVVIE------------------- |
7 | 4dylA | 0.05 | 0.05 | 2.33 | 0.82 | MapAlign | | NSGPLSKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYDKA-KDKYVRSLWKLFAHHNRYVLGVAAQLHHQHHHQLLLPGLLRSLLRQYGSAPDVPPCVTFDESLLEPGELQLNELTVESVQHTLTSVTDELAVATEMVFRRQEMVTQLQQELRNEEENTERVQLLGKRQVLQEALQGLQVALCSQAKLQAQQELLQTK |
8 | 3tnfB | 0.11 | 0.11 | 4.03 | 0.58 | MUSTER | | ELEKKLDKLERQGKDLEDKYKTYEENLEGFEKLLTDSLSEINEKMEAFSKDSEKLTQLMEKHDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKE |
9 | 4nqjA | 0.17 | 0.09 | 2.94 | 1.03 | HHsearch | | LQQHVSMEFLKLHQFLHSKEKDILTELREEGKALNEEMELNLSQLQEQCLLAKDMLVSIQAKTEQNSFDFLKDITTLLHSLEQGMTRELISR-KLNLGQYKGPIQYMVWREM-QDTLC--------------------------------------------------------------------------------------------------------- |
10 | 4fzsA | 0.08 | 0.07 | 2.80 | 0.48 | CEthreader | | ----SDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSS------EDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFD---------------------QRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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