Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560
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| SS Seq | CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCSSCCCSCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEPLQQQQQQQQQQQKQPHLAPLQMDAREKQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGDGAPVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQQAFQRNFFSMARQLPMKIRINGRAEDRAEASAAALNLTTSSIGSINMSVDIDGTTYAGVLFAQKPVVHLITGSAPQSLGSSASSSSSSHCSPSPTSSRGTPSAEPSTSWSL |
1 | 7cy4A | 0.08 | 0.08 | 3.21 | 1.20 | CEthreader | | QPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAARAAAMSVALASEYQLVQNAQLPQRWSQSARKSLAILEATARKEATAQMEAAGGSFCGQFPVDPAFKVLSLEYSAPNPDIARARRVDSVPNPPLPSHVVAIQSTAVDADLSLAMGVSLTPGRHTSYLVDARALQQSNSAAVAARKADGDKWGPACDEMFRGCRCVTGQEVVFYTAVKEPASLFKPSFDGPAFRPSWGELSGKATGVVACVLQVPIGKETDIICAEYDNLVSKGQFATVDTVNMTGN---ALIQNDGKAISKGYAVAHRARVTSNVYGKANDVSLQRLAETVWSVVEKRLSFMPAYRDLVITEQGKPFMLGATATNIISLTENQGVMLHLDTDDGVWTIILWFHRHSGIIAGGEFVLPSLGISFQPLDFTIVVFGTRPLQTTGKIIRWGVNALAQLGAAYGVDELDAKQRDQLEEVDAANSKDGVGAARRVASCMA |
2 | 6gmhQ | 0.06 | 0.05 | 2.39 | 1.62 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFAKAYPNNYETMKILGSLYAASEAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGLQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNASDWFKEALQINQDHPDAWSLIGNLHLAKGPGQKKFERILKQPST-----QSDTYSMLALGNVWLQTLHEKEKR----------HQDRALAIYKQVLRNDAKN------------------LYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQY |
3 | 2kk0A | 0.80 | 0.20 | 5.54 | 1.08 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMPDHGDWTYEEQ-FKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5yfpE | 0.06 | 0.06 | 2.46 | 0.95 | SPARKS-K | | LKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVSETAIKKKQNYIQSVELIRRYNDFYSMGKSDIVEQSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMQINDVETKNESKIVKRVFEEKATHVIQLFIQRVFAQK----IEPRFEVLLRNSLSISNLVRILHGLFTLFGKFTKSLIDYFQNQILSTTLEQCFADLFSHYLYDRSKFGIEKRSLEAILVDMTFTVNYDKEINKR-----VLLDKYKEPNSPANYSLNDVDSMLKCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDINKTAGVVNLNF-LKFISMSTEILDLLSISIKSIFLPSPEIKAQIIEMTNSQIQKMEILISTKFSAILCKQDFVPKSQELLDQDTLPAIEIVNILNLIFEQSSKFLKYSHFQVIGLFTVQPELLESLTKEGHLADIGRDIIQSYISNREDFNHDNFINSVK------- |
5 | 2kk0A | 0.87 | 0.19 | 5.37 | 1.19 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6r9tA | 0.07 | 0.04 | 1.70 | 0.67 | DEthreader | | GQTQVIAAATQCATVAAVQALNELLQHVKAHATGA-GPA-GRY-DQATDTILTVTENIFSSMGDAGEMVRQARILAQATAKMVEAAKGAAA--------------------E-QQQRLREAAEGLRMATNAAAQ------------A--AA-QSFLQPGGKMVAAAASVPTIQ-----------------SRGTPTDPAAP--KSALETVRELL---E--NP-----------SYFGCLDSVMENSKVLGEAMTGISQNAKNGNLPEFGDAIS-------T--ASKALCGFTEAAAQAAYLVGVSDNSQAGQQG-VEPTQF-RA--A------AT-VAKHTS--------ALCNSCRLAS-----------------------------------------T-NPTAKRQFVQSAK------------------PKQAA-T-------GPMGEPKPAAVAAENEEIG-----------------HIKHRVQELG-------------SEKVSHVL-S-AKSRMAANNCE------------EKLISS-------------- |
7 | 2pffB | 0.06 | 0.06 | 2.55 | 2.63 | MapAlign | | VKTKELIKNYITARIMAKRPFDLIKFSAETLSELLSIPISCPLIGVIQLAHYVVTAKLLGFTPGEL---------RSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIVQDYVNKTNSHLPAGKQVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAQDVWNRADNHFKDTYGFSILDIVIFTQPALTLMEKAAFEDLKSKSLADVMSIESLVEVVFYRGMTMQVEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEE----------- |
8 | 2kk0A | 0.74 | 0.19 | 5.41 | 0.66 | MUSTER | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHHHHHSHMPDHGDWTYEEQFKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2kk0A | 0.76 | 0.20 | 5.55 | 3.79 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHH-HHHSHMPDHGDWTYEEQFK------------------------QLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2ot4A | 0.06 | 0.06 | 2.39 | 0.97 | CEthreader | | IEDMHTVGKHATVNCVHCHDATEHVETASSRRMGERPVTRMDLEACATCHTAQFNSFVEVRHESHPRLEKATPTSRSPMFDKLIAGHGFAFEHAEPRSHAFMLVDHFVVDRAYGGRFQFKNWQKVTDGMGAVRGAWTVLTDADPESSDQRRFLSQTATAANPVCLNCKTQDHILDWAYMGDEHEAAKWSRTSEVVEFARDLNHPLNCFMCHDPHSAGPRVVRDGLINAVVDRGLGTYPHDPVKSEQQGMTKVTFQRGREDFRAIGLLDTADSNVMCAQCHVEYNCNPGYQLSDGSRVGMDDRRANHFFWANVFDYKEAAQEIDFFDFRHATTGAALPKLQHPEAETFWGSVHERNGVACADCHMPKVQLENGKVYTSHSQRTPRDMMGQACLNCHAEWTEDQALYAIDYIKNYTHGKIVKSEYWLAKMID-LFPVAKRAGVSEDVLNEARELHYDAHLYWEWWTAENSVGFHNPDQARESLMTSISKSKEAVSLLNDAIDAQVAS-------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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