>Q8IVH4 (225 residues) MPMLLPHPHQHFLKGLLRAPFRCYHFIFHSSTHLGSGIPCAQPFNSLGLHCTKWMLLSDG LKRKLCVQTTLKDHTEGLSDKEQRFVDKLYTGLIQGQRACLAEAITLVESTHSRKKELAQ VLLQKVLLYHREQEQSNKGKPLARTTNEAILLCEGAGYDGELTAKRRKQQKVWMWNLIQE SVLEHFRTHPTVREQIPLLEQKVLIGALSPGLAADFLLKAFKSRD |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MPMLLPHPHQHFLKGLLRAPFRCYHFIFHSSTHLGSGIPCAQPFNSLGLHCTKWMLLSDGLKRKLCVQTTLKDHTEGLSDKEQRFVDKLYTGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLLYHREQEQSNKGKPLARTTNEAILLCEGAGYDGELTAKRRKQQKVWMWNLIQESVLEHFRTHPTVREQIPLLEQKVLIGALSPGLAADFLLKAFKSRD |
Prediction | CCCSSCCCHHHHHCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCSSSSSSSCCCSCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC |
Confidence | 971222860345235445886664145506987678888877898620456766665316541125560322324567626779999999999974212476332477777678899999999999996377667887527999999978999999744928999999999999999999999999849999999999999999299999999999999996379 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MPMLLPHPHQHFLKGLLRAPFRCYHFIFHSSTHLGSGIPCAQPFNSLGLHCTKWMLLSDGLKRKLCVQTTLKDHTEGLSDKEQRFVDKLYTGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLLYHREQEQSNKGKPLARTTNEAILLCEGAGYDGELTAKRRKQQKVWMWNLIQESVLEHFRTHPTVREQIPLLEQKVLIGALSPGLAADFLLKAFKSRD |
Prediction | 432023303441141214343431300232544324424336415324441142113031123000210202333436346404302420420043145425512130336345516304520430042134446514440111014203303511464330351045013500252035203620472650363155126304746131230043006305778 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCSSCCCHHHHHCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCSSSSSSSCCCSCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC MPMLLPHPHQHFLKGLLRAPFRCYHFIFHSSTHLGSGIPCAQPFNSLGLHCTKWMLLSDGLKRKLCVQTTLKDHTEGLSDKEQRFVDKLYTGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLLYHREQEQSNKGKPLARTTNEAILLCEGAGYDGELTAKRRKQQKVWMWNLIQESVLEHFRTHPTVREQIPLLEQKVLIGALSPGLAADFLLKAFKSRD | |||||||||||||||||||
1 | 3md0A | 0.22 | 0.19 | 5.88 | 1.31 | FFAS-3D | ------------LGGVTRATREGFDVILIETG---------QSEVAVANMVDTFVL---------LTLARTGDQLQGIKKGVLELADIVVVNKADGEHHKEARLAAR------ELSAAIRLIYPREWRPPVLTMSAVEGRGLAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRAGELTPALAAQQILEIANLTD | |||||||||||||
2 | 2p67A | 0.31 | 0.20 | 6.04 | 2.94 | HHsearch | ------------------------------------------------------------------------------SLINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNTLLIREGLKVAQRARELMLLCEAAGYDGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQT-- | |||||||||||||
3 | 2wwwD | 0.52 | 0.35 | 10.16 | 0.66 | CEthreader | ------------------------------------------------------------------------DHTEGLSDKEQRFVDKLYTGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLLYHPLAFRVGRGHKLSVLTNEAILLCEGAGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAIKRGIIEMADLVAVTKSDGDLIVPARRIQAEYVSAL | |||||||||||||
4 | 3gjxA1 | 0.07 | 0.07 | 2.89 | 0.75 | EigenThreader | LKEHPD---AWTRVDTISQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSMILVQILKQEWPKHWP----TFISDIVGASRTSCQNNMVILKLLSEEVFDLKDSMCNEIFQLCQFVMENSQNAPLVHATLETLLRFLTLIYKFLNVNVSLKCLTEIAGVFTLTMMQLKQMLLAYSNGFIQNLSLFLCTFLKEHGQLLEKRALHYMLLVSEVE | |||||||||||||
5 | 2p67A | 0.15 | 0.11 | 3.75 | 1.18 | FFAS-3D | --------------------AAGYDVVIVETVGVG------QSETEVARMVDCFISL---------------QIAQGIKKGLMEVADLIVINKDDG--------------DNHTNVAIARHMYESALHILRRKCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQT-- | |||||||||||||
6 | 5cwjA | 0.12 | 0.08 | 2.68 | 0.81 | SPARKS-K | -------------------------------------------------------------DSEEEQERIRRIRKSGTEESLRQAIEDVAQLAKKQDSEVLEEAIRVILRGSEEALRQAIRAVAEIAKEAQDS----------EVLEEAIRVILRIAKESGSE---------EALRQAIRAVAEIAKEDPRVLEEAIRVIRQIAEESGSARRQAERAEEEIRRRA | |||||||||||||
7 | 6xu2A | 0.11 | 0.08 | 3.04 | 0.58 | CNFpred | ----------------------------------------------------SFGIKTAGLEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMVPLVRVAAAESMPLLLECARRGPEYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGCLNNEHFEELGGILKAKLEEHFKNQEL-DEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKV | |||||||||||||
8 | 5yfbA | 0.07 | 0.05 | 2.22 | 0.83 | DEthreader | SKKLYTHYVTEASWAGARIIQAATDLYLILIQYVKIIPRVDAEFEVVGSFLKIYALFI----------------L-AKQYTQMIEGYVKSFNSGSIP-EHKAASTEWV-KDIGPVVES--YI--GFVE-TYVDPYGG---FEVFRPINIPNYY---GQTSVLGVSSSMEECRAETVALYLVSEDIQYITLLMARAGLAFHQAHMQA------------------- | |||||||||||||
9 | 3md0A | 0.40 | 0.25 | 7.34 | 0.95 | MapAlign | -------------------------------------------------------------------------------------VDGLATAVRGGDRAALPRAITLVESTRPDHREQAQQLLLRLLPDSGNAIRPSTLGGVTRATRETVVLLEAAGFAGEFDARRRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRAGELTPALAAQQILEIANLTD | |||||||||||||
10 | 3md0A | 0.21 | 0.21 | 6.61 | 0.64 | MUSTER | LLRLLPDSGNAHGMHLIERGHRVAVLAVRMARLAVHPNAYIRPSTLGGVTRA-VLLEAAGFDVILIETGQSEVAVANMVDRTGDQLQGIKKGVLE--LADI--VVNKADGEHHKEARLAARELSAAIRLIYPREALWRPP-LAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRAGELTPALAAQQILEIANLTD | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |