Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCHHHHHHCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSCCCCCCCSSSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCC METMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHR |
1 | 1vt4I | 0.09 | 0.09 | 3.28 | 0.54 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 1ya0B | 0.05 | 0.05 | 2.22 | 0.62 | EigenThreader | | QAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLLLQELCTVFNVSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLATIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHVYLSKSLEKLSPLREKLEEQFKELLFQKAFNSQQLVHVTVINLFQLHHLRQLCWTQLLALFMSFLGILCKC |
3 | 3qc1A | 0.11 | 0.07 | 2.59 | 0.55 | FFAS-3D | | ----------------------------------------------------------------------------LPELFETSKKLLEDVEVATEPTGGLELLEKAAGMLSQLDLFSRN------EDLEEIASTDLKYLMVP--ALQGALTMKQVNPSKRLDHLQRAHFVHFLTQCHCYHAYPNLVAMASQRQAKIERYKQKKE--VEHRLSALKSAVESGQADDERVREYHLLHLRRW----IAVSLEELESIDQE-IKILKEK |
4 | 4btgA | 0.10 | 0.10 | 3.60 | 0.55 | SPARKS-K | | --------GFNLKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVARLFFQYAQAELVNQFTEYHQSTANPEIWRKLTAYITIKADAVGKVPPTAILEQLRTLAPSEHELFHHITAAYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSGALAPALISQHLANAATTAFERSRGNFDANAVVSSVLTILGRLWSPSLRSNLALFIAYQDMVKQGRIEAMSERPIN--ETTSYIGQT |
5 | 2fgeA | 0.10 | 0.06 | 2.09 | 0.71 | CNFpred | | ----------------------------------------------------------------------------LVPLFCQSLLEMGTK-----DLTFVQLNQLIGRKT----------GGISVYPLTSSVDEPCSKIIVR-GKSMAG------RADDLFNLMNCLLQEVQFT-------DQQRFKQFVSQSRARMENRLRGS-----GHGIAAARMDAM----LNIAGWMSEQMGGLSYLEFLHTLEKKVEDWEGISSSLEEI |
6 | 4av3A | 0.07 | 0.05 | 1.90 | 0.83 | DEthreader | | ----------------------------------------------AL-LILVGFAAFVMATRANRVAIALKAYQGGSVMGLSVGGFLLGLVL--VYLIFGK--------------------------INFVPFAMVSACSIIADLEVGVSILAILISYPIFFALGL-CS--G-----PQRELNISLWTSALLTVLTAFLTYISPWFS--AIIGIFSGILIGFWEIGKGFAIGSAIFAALSLFAYMLLNMLIAIGVLSGAMLAGLL |
7 | 1vt4I3 | 0.09 | 0.09 | 3.30 | 0.89 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
8 | 5hamA | 0.13 | 0.12 | 4.03 | 0.40 | MUSTER | | TAQLDEKKVQPAITFRNTATEEMLKYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQ-----INEDILNRATKDIKDNG---KEAAVIPIEMGYG----WTVLVA---------------KYDKKDNQIILTFNDSLGNSINYDQKLPKLIDKTLGNLPNKPEQTKQQTDQSACGVFTVDNGIKIAKGQAILSTEESKGEKGLRLREHHAQILTDAM---FKQDAQWIRQ |
9 | 3adgA | 0.29 | 0.08 | 2.29 | 0.90 | HHsearch | | ------------------------------------------------------------------------------------------------SHVFKSRLQEYAQKYKLP--------TPVYEIVPSHKSLFQSTVILDG-VRYNSLPGFFNRKAAEQSAAEVALRE-L-AK------------------------------------------------------------------------------------------ |
10 | 3o0yA2 | 0.08 | 0.08 | 2.99 | 0.48 | CEthreader | | GVMNEILLAQGYTKGTVGERMVALNEEPRFLYEDSIAGREELLSDINGYITEVTAKMAPVFRTTPSYQVEVKSFPVEVQDGAPGGQYTSPAVDGSKPGIYWINLRDMKANPKFGLKTLTYHEANPGHHWQAPYNAYTEGWALYSEQVAYELGMYENDPFGDLGRLQAELFRAVRLVVDTGLHDKRWREQAISYMSEQTGTA----------ESDVVAEIERYMAWPGQALGYKLGMLKILSLREQAKARLGDKFDLAEFHDVVLLN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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