Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCSSSCCCCCSCCCCCCSCCCCCCCCSCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCSSSSCCCCCSCCCCCCSCCCCCCCCCCCCCSSSSCCCCSSSSCCCCCSSCCCCCCCCCSCCCCCCCCCCCCCCCSSSCCCCCSSSSCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCSSSCCCCCSSSSCCCCCSCCCCSSSSCCCCCCCCCCCCCCSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCSSCCCCCCSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCSSSSSSSSCCCCCCSSSSCCCCCCCCSSSSSSSSSCCCCCSSSSSSSSSCCCCCCSSSSCSSSSSSCCCCCCCCCCCC MPLPWSLALPLLLSWVAGGFGNAASARHHGLLASARQPGVCHYGTKLACCYGWRRNSKGVCEATCEPGCKFGECVGPNKCRCFPGYTGKTCSQDVNECGMKPRPCQHRCVNTHGSYKCFCLSGHMLMPDATCVNSRTCAMINCQYSCEDTEEGPQCLCPSSGLRLAPNGRDCLDIDECASGKVICPYNRRCVNTFGSYYCKCHIGFELQYISGRYDCIDINECTMDSHTCSHHANCFNTQGSFKCKCKQGYKGNGLRCSAIPENSVKEVLRAPGTIKDRIKKLLAHKNSMKKKAKIKNVTPEPTRTPTPKVNLQPFNYEEIVSRGGNSHGGKKGNEEKMKEGLEDEKREEKALKNDIEERSLRGDVFFPKVNEAGEFGLILVQRKALTSKLEHKDLNISVDCSFNHGICDWKQDREDDFDWNPADRDNAIGFYMAVPALAGHKKDIGRLKLLLPDLQPQSNFCLLFDYRLAGDKVGKLRVFVKNSNNALAWEKTTSEDEKWKTGKIQLYQGTDATKSIIFEAERGKGKTGEIAVDGVLLVSGLCPDSLLSVDD |
1 | 4gwmA3 | 0.20 | 0.05 | 1.68 | 1.13 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFMDSCSFEENVCGMIQSSGDNADWQRVSQVPRGGFFMHFDSSSVNVGATAVLESRTLYPK-RGFQCLQFYLYNSGSESDQLNIYIREYSADLVEEIKEIPTGSWQLYHVTL--KVTKKFRVVFEGRKGSGSLGGLSIDDINLSETRC--------- |
2 | 3gavA | 0.14 | 0.13 | 4.41 | 1.13 | SPARKS-K | | IPAPRCTYPDIKHGGLYHENMRRPYFPVAKYYSYYCDEHFETSYWDHIHCTGW--SPAVPCLRKCFPYLENGYNQNHGRVACHPGYALPTCMENGPRCIVKTCSESQYTYALKEKAKYQCKLGY-VTADGETSGSITCAQPTCIKSCDIPVDTLDYEC-HDGYESNTGSIVCGYERECELPKIDVHPDRKKYKVGEVLKFSCKPGFSVQCYHFGLS-PDLPICKEQVQSCGPNGNVYGHSEVVEYYCNPRFLMKGIQCVD--GEWTTLPVCIVEESTGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGHRSVWTQLPQCVAIDKLKKCKSSNLIILEEHLKNKKEFDHNSNIRGKEGWIHTVCILCPPPPQIPNSHNMTTTLNYRDGEK---VSVLCQENYLICRWPLCVEKIPCSQPPQIEHG--------TINSSRSS-------QESYAHGTK--LSYTFRISEEN----ETTCYMGSSPPQCEGPCKSPPEISHG--VVAHMSDSYEEVTYKCFEGDGPAIAKCLGEKWSHPPSCIKTDCLSLP |
3 | 2c9aA | 0.22 | 0.06 | 1.93 | 2.14 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSGGCLFDEPTCGYSQSEGDDFNWEQVN-WMPSGSFMLVNASGRPEGQRAHLLLPQL--KENDTHCIDFHYFVSSSPPGLLNVYVKVPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITS-GHQGYLAIDEVKVLGHPCTRTPHFLRI |
4 | 4xbmB | 0.29 | 0.12 | 3.69 | 1.62 | HHsearch | | FGFTWPGTFSLIIALHTDQRHLTVGEEWSQDLHCDEQHGFCDKPGECKCRVGWQGRYCDEC--IRYPGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHKPCKNGATCTNTQGSYTCSCRPGYTGA---TCEGIDECDPSPCKNGGSCTENSYSCTCPPGF-----YGKICESAMTCADGP--CFNGGRCSDSPDGYSCRCPVGYS-----G-FNCEKIDYCSS--SPCSNGAKCVDLGDAYLCRCHCDD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 7aq1A2 | 0.20 | 0.05 | 1.68 | 1.13 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFMDSCSFEENVCGMIQSSGDNADWQRVSQCQGSGFFMHFDSSSVNVGATAVLESRTLYPK-RGFQCLQFYLYNSGSESDQLNIYIREYSADLVEEIKEIPTGSWQLYHVTL--KVTKKFRVVFEGRKGSGSLGGLSIDDINLSETRC--------- |
6 | 4xbmB | 0.19 | 0.10 | 3.27 | 1.00 | MUSTER | | FTWPGTFSLIIEALHISRLATQRHLTVGEEWSQDLHSSG-RTYSYRFVCDEHYYGEG---CSVFCRPAFGHFTCGERGEKVCNPGWKGPYCTEPI--CLPGCDEQHGFCDK---PGECKCRVGWQGRYCDECIRYPGCL----HGTCQQ---PWQCNCQEGWGGLFCN----QDLNYCTHHK-PCKNGATCTNTGGSYTCSCRPGY-----TGATCELGIDECD--PSPCKNGGSCTDLENSYSCTCPPGFYGK--ICELSAMTCADGPCFNGGRCSDSPGGYSCRCPVGYSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCHCDD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 5l73A | 0.26 | 0.07 | 2.18 | 2.10 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNCEFGKTFCHWEHDNHVQLKWSVLTSHTGDGNFIYSQADENQKGKVARLVSPVVYS-QNSAHCMTFWYHMSGSHVGTLRVKLRYQYDQLVWMAIGHQGDHWKEGRVLLHKS-LKLYQVIFEGEIGKGNLGGIAVDDISINNHISQEDCAKP-- |
8 | 7aq1A2 | 0.21 | 0.06 | 1.78 | 1.55 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFMDSCSFELNVCGMIQSSGDNADWQRVDHSNGSGFFMHFDSSSVNVGATAVLESRTLYPK-RGFQCLQFYLYNSGSESDQLNIYIREYSATLVEEIKEIPTGSWQLYHVTLKV--TKKFRVVFEGRKGSGSLGGLSIDDINLSETRC--------- |
9 | 4gwmA | 0.12 | 0.08 | 2.84 | 0.46 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENFDVDGGMDQDIFDINEGLGLDLFEGDIRLDRAQIRNSIIGEKYRWPHTLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSSLSFMDSCSFELENVCGMIQSSGDNADWQRVSQVPNSGFFMHFDSSSVNVGATAVLESR-TLYPKRGFQCLQFYLYNSGSESDQLNIYIREYNLTLVEEIKEIPTGSWQLYHVTLKVTKKF--RVVFEGRKGSGSLGGLSIDDINLSETRCPHHIWHIRN |
10 | 5l73A | 0.28 | 0.07 | 2.27 | 1.12 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNCEFGWGFCHWEHDNHVQLKWSPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYS-QNSAHCMTFWYHMSGSHVGTLRVKLRYQKPELVWMAIGHQGDHWKEGRVLL-HKSLKLYQVIFEGEIGKGNLGGIAVDDISINNHISQED------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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