Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCSSSSCCCCCCSSCCCCCCCCSSSSSCCCCSSSSSSSCCCCCCHHHCCSSCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSSCCSSSCSSSSSCCCSSSSCCCCCCCCCCCCSSSSHHHCCCCCCCCCSSSSSSSCCCSSSSSSCCSSSCCCCCCCCSSSSSSSSCCCCSSSSSCCCCCCCCCCCCCCCCSSSSSSSSSSSSSCCCCCCCCSSSSSCCCCCSSCCCCSSSSSSSSSSSSCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSCCCCCCCHHHCCCCCCCCSSSSCCCCCCCCCCSSCCCC MRGELWLLVLVLREAARALSPQPGAGHDEGPGSGWAAKGTVRGWNRRARESPGHVSEPDRTQLSQDLGGGTLAMDTLPDNRTRVVEDNHSYYVSRLYGPSEPHSRELWVDVAEANRSQVKIHTILSNTHRQASRVVLSFDFPFYGHPLRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFNPGYSDNSTVVYFDNGTVFVVQWDHVYLQGWEDKGSFTFQAALHHDGRIVFAYKEIPMSVPEISSSQHPVKTGLSDAFMILNPSPDVPESRRRSIFEYHRIELDPSKVTSMSAVEFTPLPTCLQHRSCDACMSSDLTFNCSWCHVLQRCSSGFDRYRQEWMDYGCAQEAEGRMCEDFQDEDHDSASPDTSFSPYDGDLTTTSSSLFIDSLTTEDDTKLNPYAGGDGLQNNLSPKTKGTPVHLGTIVGIVLAVLLVAAIILAGIYINGHPTSNAALFFIERRPHHWPAMKFRSHPDHSTYAEVEPSGHEKEGFMEAEQC |
1 | 2pffB | 0.08 | 0.07 | 2.88 | 1.16 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGNRADNHFTYGFSINPVNLTIHFGGEKGKRINYSAMIFETIVDGTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALAS-------LADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRAL---- |
2 | 3nvnB2 | 0.31 | 0.03 | 1.03 | 1.28 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANCNKHKSCSECLTAT-DPHCGWCHSLQRCTFQGDENLENWLDISSGA----KKCPGAP-------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 6fkmA | 0.06 | 0.06 | 2.71 | 0.85 | CEthreader | | ------NSTITNVAAFDTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILDCPLNAVRSPTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANSSTVAFIAPGPPQHPVTNVMYVGVTYTNVASRSLIASSAVTTGTRTFINSYARETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQEDSNYYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDDVLFAVFSKGEGNTPTNNSALCIYSLKSIRRKFM-QNIKSCFNGSGMRGLDFISPSMPCVLTKLQTIGEDFCGLDVNSPLGGETPITSVPVAMFNTKLTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIANEYASFAVDLGSEINRDMQFDNQNLYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSPRSNCQDDANDPLYWVSYKTGKC |
4 | 1yo8A | 0.07 | 0.06 | 2.27 | 0.75 | EigenThreader | | -------------------DGCLSNPCFPGAQCSSFP--DGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTHCLPCPPRYRGNGVGLEAAKTEKQVEN----PCKD-----KTHNCHKHAECIYLGHFSDPY----KCECQTGYAGDG------------LICGEDSDLDGWPNLNLVCATNATYHCI-----KDNCPHLPNSGQE--------DFDK---DGIGDACDDDDDNDGVTD----EKDNCQLLFNPRQADVGDRCDNCP-----------YVHN-----PAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNT-------DQRDT--DGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDACDPD------------------------DDNDGVP----DDRDNCRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDDV |
5 | 6fkmA | 0.14 | 0.07 | 2.51 | 0.44 | FFAS-3D | | --------------------------------------------RSLEKTKMFQIASSAVTTGTRTFINSYARETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYIT---------KLVRICQEDSNYYSYTEIPVQGGTKFNLVQAGFLGKPSFIYSLKSIRRKFMQNDVNSPLGGE--TPITSVPVAMFNTKLTSVAAT----------STSGYTVVFVGTSDGFLKKVV---------IESSSIANEY---ASFAVDLGSEINRDNQNLYIY-----------VMSKTKVSKVKVFDCSDYKTCGDCLGARDPY-CGWCSLENKCSQDDANDPLYWVTGKC--------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6f1tg | 0.09 | 0.07 | 2.56 | 0.86 | SPARKS-K | | LHSEEFLSFFDHSTRIVERALSEQINIKLSLNRQFFDERWSKHRVVSCLDWSSQYPENNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCSAVMSATFAKFHPNTYSLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQN--AHNL--ISISTDGKICS--------------------WSLDMLSHPMELVHKQSKA-----VAVTMSFPVGDVNNF--VVGSEEGSVYTACRHKAGISEMFEGHQGPI-----TGIHCHAAVGAVDFSHL--FVTSS---------FDWTVKLWSTKNNKPLYSFEDN---AGYVYDVMWSPTHPALCVDGMGRLDLWN---------------LNNDTE----VPTASISVEGNPALNRVRWTHSGREIDSEGQIVIYDVGEQIAVP----------RNDEWARFGRTLAEINAN------------------------------------------------------------ |
7 | 4ktrA | 0.10 | 0.05 | 1.71 | 0.82 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------ERTLDLSQGVTSRKVSQRMKNGATITIHEEKFASYR---KHAVLMKYTVESTDAVLDTGIDYDVWSINGDHLQGHHYFSHPTGDGVTAKTVS----------YEDTVTVVETCSLDADASEEDYQNPDGSGRTFSLSLEAKPVTLEKAMIIYSSNDVD--NPQDEALLE--------AKHMQSYEEEKAANRLEWDNLW-------------------------------------------------SHYDVTIQ-------------------NIIDQVALRFNIYHAIIATPLPIGARGLSCQYQGAAFWDQEIYNMPMYLYS--------------------------- |
8 | 5a22A | 0.06 | 0.04 | 1.66 | 0.67 | DEthreader | | IVSYAKALASDLARIVLFQQFNDK----VPMFKG-L-------LTAVIKKMLDSSAICIANHIDQKGWTILLLKVLAQYGK--VTNQIPTANSSST----------------------------------------VTESLFWSFGNPEIAFRITIDKLSLNIAMG-MSP-NLLKTEVKKITLYHEERLRSLWSINPL-PRFLSEFKSG------TFLGVA-------------D-GLISLFRTNSFKKKYHRELDDLIVR---------------SEVS----------------------------------------------------SL-----------------------THLGKLHLRRGSCKMWTCS----DTTVIGTTVSWFVEPLAMTILSNIHSLTGEEWTK--EG--FLGDLLASGLIYLIDLSVGVIRNYK---PLLSGRLQLPTGHGAALRENVHSRGIF----PSALTLGGDKSRCVNGCWSDL |
9 | 1vt4I3 | 0.06 | 0.05 | 2.31 | 1.16 | MapAlign | | -----TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGG---- |
10 | 5hrmA | 0.13 | 0.11 | 3.79 | 0.61 | MUSTER | | LQGQTTI----DVVSGRSKLPYHAGGRTDIWNRGGNLQLSWVDQ---TFKQAGPITANSRSALFLREPAGVAVIDRDPRAPKPVRLLRDAVETMHAIAAPG---RKVLYSGGIAGRGEEDAAWLS-SNCLNPKLQS-EFKWPANIH---MVTISPNGRVYGTEVVPGLGSGKGGLH-----LDISDMKR---------PRYLGRFG-VTRPNGLTAGFTPHEVSISHDERRIYAAVLASVPVGASILASDGDVPVENGSVYILDNSDIVDGRSQPKMRLVGEAKQGG----FHSVVPASI---------------NGVPH----AAELGACPGTWDEKNGEFKLQMNIKENCDAIRFTPRKEDPYASFIPIPDITARLGAVGSHFNDVDDARNTRDPTKPKPGANPDTPLSGNGLNWTGLNDQVTDGCMSHVRYV---------IWF----CVTTGFHVVELNPDLRARLGFPT-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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