Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCSSSSSSSSCCCCHHHHHHHHHCCCCCCHHHHHCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCSSCCCCHHHSSSCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSTYAVKICKAPEPKTVSYCSPSVPVHFNIQQDCGHFVASVPSSMLSSPDAPKDPVPALPTHPPAQEQDCVVVITREVPHQTASDFVRDSAASHQAEPEAYERRVCFLLLQLCNGLEHLKEHGIIHRDLCLENLLLVHCTLQAGPGPAPAPAPAPAPAAAAPPCSSAAPPAGGTL |
1 | 1z57A | 0.15 | 0.13 | 4.41 | 1.31 | SPARKS-K | | GRHVAVKIVK-----NVDRYCEAARSEIQVLEHLNTTD-------------PNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLP-----FRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNRDERTLINPDDFGSATYDDEHHSTLVSTR |
2 | 2acxA | 0.16 | 0.14 | 4.55 | 1.09 | MUSTER | | GKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNS-------------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH-----MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVV |
3 | 2ac3A1 | 0.20 | 0.14 | 4.40 | 1.67 | FFAS-3D | | SQEYAVKIIEKQPGHIRSRVFREVE----MLYQCQ------------------GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR-------RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPCDFDLGS------------------------ |
4 | 6bhcA | 0.61 | 0.41 | 11.79 | 1.53 | CNFpred | | LNNYAVKICKS----HSLAVRQSLAVHFNIQQDCGHFLAEVPNRLLPWED----------------QRSHVVVITREVPCLTVADFVRDSLAQHGKSPDLYERQVCLLLLQLCSGLEHLKPYHVTHCDLRLENLLLVHY------------------------------------ |
5 | 3i7bA | 0.13 | 0.10 | 3.36 | 0.83 | DEthreader | | KECAVKVISVKQKTD-KESLLREVQLLKQLD-HPNIMK--LYE-FF-ED--KG----------------YFYLVGEVYTGGELFDEIISR---K--RFS--EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAEQIV---------------KLQALYMLLKCGN |
6 | 3q5iA | 0.16 | 0.13 | 4.20 | 1.31 | SPARKS-K | | HSEKAIKVIKKKF-------HEEIYNEISLLKSLDHNIIKLFDVFED--------------------KKYFYLVTEFYEGGELFEQIINRHKFD-------ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKK |
7 | 4ix3A | 0.14 | 0.14 | 4.66 | 0.47 | MapAlign | | -QDVVLKNAKADVMAAEELLECEMDVNYHVHANAKGTCARFM--GCIE-----LGAKDGGEIYNGTLTEGLWLMWANEGENTVEALMRRTAPLATACADATLGVTKKAMRELLGSLARLHECGVVHRDVKPANLIAAEKDGGVLKLIDLGAAALCLPLPETLNYYPGDGPADPRY |
8 | 6o5zA | 0.09 | 0.08 | 3.03 | 0.31 | CEthreader | | RAPVAIKVFKKLQAGSIAIVRQTFNKEIKTMKKFESNILRIFGICIDET----------------VTPPQFSIVMEYCELGTLRELLDREKDLT-------LGKRMVLVLGAARGLYRLHHSEELHGKIRSSNFLVTQGYQVKLAGFELRKTQTSMDRVKSTAYLSPQELEDVFY |
9 | 4yhjA | 0.18 | 0.15 | 4.86 | 1.09 | MUSTER | | GKMYACKKLQKKRI-KKRKGEAMALNEKRILEKVQS-------------------RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNLGN-----PGFDEQRAVFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHRISDLGLATEIPEGQR--VRGRVGTVGYMAPEVV |
10 | 3c4wB | 0.21 | 0.18 | 5.63 | 0.69 | HHsearch | | GKLYACKKLNKKRLKKR-KGYQGAMVEKKILAKVHSFIVSL--------------------AYAFETKTDLCLVMTIMNGGDIRYHIYNVDED---NPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRILGLAVELKAG---QTKTKGYAGTPGFMAPEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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