Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC MTEEACRTRSQKRALERDPTEDDVESKKIKMERGLLASDLNTDGDMRVTPEPGAGPTQGLLRATEATAMAMGRGEGLVGDGPVDMRTSHSDMKSERRPPSPDVIVLSDNEQPSSPRVNGLTTVALKETSTEALMKSSPEERERMIKQLKEELRLEEAKLVLLKKLRQSQIQKEATAQKPTGSVGSTVTTPPPLVRGTQNIPAGKPSLQTSSARMPGSVIPPPLVRGGQQASSKLGPQASSQVVMPPLVRGAQQIHSIRQHSSTGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNTSLLVNIPQPTPASLKGTTATSAQANSTPTSVASVVTSAESPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLETQGRMSAATVLSREPYMCAQCKTDFTCRWREEKSGAIMCENCMTTNQKKALKVEHTSRLKAAFVKALQQEQEIEQRLLQQGTAPAQAKAEPTAAPHPVLKQVIKPRRKLAFRSGEARDWSNGAVLQASSQLSRGSATTPRGVLHTFSPSPKLQNSASATALVSRTGRHSERTVSAGKGSATSNWKKTPLSTGGTLAFVSPSLAVHKSSSAVDRQREYLLDMIPPRSIPQSATWK |
1 | 5gyyA | 0.07 | 0.04 | 1.82 | 1.25 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AALSTLSSTESLTISSNRTLVSPGNIFELGFFRTNSRWMWYKKLSGRTYVWVANRDNPLSNSIGTLKISNMNLVLLDHSNKSVWSTNLTRENVRSPVVAELLANGNFVVRDPSGFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLVSWRSSDDPSSGDFSYKLDIQRGLPEFYTFKDNTLVHRTGPWNGIRFSGIPEEQQLSYMVYNFTENSEEVAYTFLVTNNSIYSRLTINFSGFFERLTWTPSLVIWNPIWSSPASFQCDPYMICGPGSYCDVNTLPLCN--CIQGFKPLNVQEWDMRDHTRGCIRRTRLSCRGDGFTRMKNMKLPETTMATVDRSIGVKECEKKCLSDCNCTAFANADIRDGGTGCVIWTGRLDDMRNYAVSGQDLYVRLAAADV----------------------- |
2 | 6gmhQ | 0.07 | 0.06 | 2.60 | 1.27 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAM---------QAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMHEAEKLYKNILREH--------------PNYVDCYLRLGAMARDK---GNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNVWLQTLHQPT-----------RDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIG |
3 | 5yfpE | 0.08 | 0.07 | 2.67 | 1.29 | SPARKS-K | | ELDPKWKKLLKTDNFLGGLTVNEFVQELSK----DHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLDPK------------------------------------------------PYIRTFESTLELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVS-------PLGDKLETAIKKKQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLKSKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELFTKLNEIAIILNNVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETS--MQNLINDVETVIKNESKIVKRVFEEKATHVIQLFI------QRVFAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFGYFQLLEIDDSNQI-------LSTTLEQCFADLFSGIEKRSLEAILVDMTSTVNYDKEIDKYKEKLSTNTASDINYSLNDVDSMLKCVVESTARVMELIPNKAGIVDSYMEIALEVAYWKICKVDINKTAISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTINIILQETFVPKSQLLDQDTLPAIEIVNILNLIF--EQSSKFLKGK |
4 | 1vt4I3 | 0.05 | 0.05 | 2.13 | 2.37 | MapAlign | | --LHRSIVDHYNIPKTFDSDDLIP-PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL----------------------------------------QQLKFYKPYICDNDPKYERLVNAILDFLPKIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
5 | 2l2lA | 0.98 | 0.07 | 1.86 | 2.59 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------GSPEERERMIKQLKEELRLEEAKLVLLKKLRQSQIQKEATAQK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2pffA1 | 0.06 | 0.06 | 2.75 | 1.13 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLT--NILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT |
7 | 3s9vA | 0.08 | 0.07 | 2.84 | 1.03 | EigenThreader | | FLAYDRILATLACIITLTLWRTGETQVQKGIEFFRTQAGKMEDEADS-----HRPSGFEIVFPAMLKEAKILGLDLPYDLPFLKQIIEKREAKLKRIPQEIVD----WQKIMKLQSKDGSFLSSPASTAAVFMRTGNKKCLDFLNFVLKKFGLFERLWAVDTVERL--------------------GIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEF----FCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYP----WHKSMPRLEARSYIENY----------GPDDVMPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTDLNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTVILDDLYDQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYTKEAEWSEAKYVPSFNEYIENASVSIALISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAERGQGEVASAIQCYMKDHPKIS------EEEALQHVYSVMENALEELNREFVNNKIPFYMQGD |
8 | 5yfpB | 0.07 | 0.06 | 2.60 | 1.28 | SPARKS-K | | NLLVTYKDLIWNSLINSNFNIDQPQETILSLFSKLNLENFIKNTTSSSNENPISGHMISKIIHSQRLILQNNTNQDKKINQLFQIISDTGKDSEGLKSTV-------EPNKVNTISGTSYLNLNCQPSSQGLTDSPTIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLINEKRKENILIGDSNIIESYQKSLILKEEQINLKGEEFITSVSQNLISFFT-SSQSSLPSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLSCLRYLPKIVETELAQLNITTNGI--TICRNTLSTIINRCVTKLRDISNFYQLENWQVYETVTFSSKSQDSSKNLTFEYGVTQFPEIVVSIKTTRDLLFA--YEKLPIINGISVVSYPSKQLLTGIEIISMEAVLEAILKNAAKDKDNPRNSHT----------------------------------------ILTLTNLQYFREC-AFPNILQYFDDAFEWNLASKNLELFSLLSKMESSIFGNYLSDLKINLRDTLEFHEINWPMYTSNSFRVGDYIICFRIGPQLIHKILIETQIFIARYLFEAFKPYVGNLSNDGSLQ---------IFFQKVMGPLLEKDTEATLRACLQ------NCFQNDTNR |
9 | 2xkxA | 0.07 | 0.06 | 2.57 | 1.58 | MapAlign | | --LERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRV------NDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEE--------------DIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGP---------------------------ADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHDLYIRALFDYDKTDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERRTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYNSHLYGTSVQSV-----REVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDLSGPYIW---- |
10 | 4btgA | 0.10 | 0.10 | 3.53 | 1.27 | SPARKS-K | | --GFNLKVKDLNGSA-----------RGLTQAFAIGE----LKNQLSVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVRLFFQYAQAG-----GALSVDELVNQFTECNPEAYITGSSNRAIKADA----VGKVP--PTAILEQLRTHITTDFVCHVLVDCVRASDLRRVDSKMLQATFKAKGALAPALISQHLANAA------TTAFERSRGNFDASPSTPKELDPSARLRNTNGIDQLRALFIRGRAEVIFSDEELSSTIIPWFIESEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIAFVKNRTAVYEAVSTVNSNGAEM-TLGFPSVVERDYALDPMVAIAALRTGIVDESLEARASNDNYYAAVAHNPEVVVSVAAEQGSLYLVWNVRTELRIPVGY--NGSIRTP---------EPLEAIAYNKPIQPSEVLQAKVLDIH-IWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTARRTSRDDAEKLAIDGRRMQTGIGASAVLAQSRISSDLHVGINRHRIRIWAGLAVLQMMGLLSRSE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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