>Q86YL7 (162 residues) MWKVSALLFVLGSASLWVLAEGASTGQPEDDTETTGLEGGVAMPGAEDDVVTPGTSEDRY KSGLTTLVATSVNSVTGIRIEDLPTSESTVHAQEQSPSATASNVATSHSTEKVDGDTQTT VEKDGLSTVTLVGIIVGVLLAIGFIGAIIVVVMRKMSGRYSP |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MWKVSALLFVLGSASLWVLAEGASTGQPEDDTETTGLEGGVAMPGAEDDVVTPGTSEDRYKSGLTTLVATSVNSVTGIRIEDLPTSESTVHAQEQSPSATASNVATSHSTEKVDGDTQTTVEKDGLSTVTLVGIIVGVLLAIGFIGAIIVVVMRKMSGRYSP |
Prediction | CCCCCSSSSSSCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSSSCCCCSSSSSSHHHHHHHHHHHHHHHHHHHSSSHHHCCCCCC |
Confidence | 941114333321112221024552136666765778888633788212100567678876667764555666777888834456777766763358776666401155556678865213213882355413679999999997633000011343066699 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MWKVSALLFVLGSASLWVLAEGASTGQPEDDTETTGLEGGVAMPGAEDDVVTPGTSEDRYKSGLTTLVATSVNSVTGIRIEDLPTSESTVHAQEQSPSATASNVATSHSTEKVDGDTQTTVEKDGLSTVTLVGIIVGVLLAIGFIGAIIVVVMRKMSGRYSP |
Prediction | 734131311132313123224424333464433453464441343244423334455544675234334444743573535514456444545654644444523354446535764554355541310102013113223323321210000232456358 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCSSSSSSCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSSSCCCCSSSSSSHHHHHHHHHHHHHHHHHHHSSSHHHCCCCCC MWKVSALLFVLGSASLWVLAEGASTGQPEDDTETTGLEGGVAMPGAEDDVVTPGTSEDRYKSGLTTLVATSVNSVTGIRIEDLPTSESTVHAQEQSPSATASNVATSHSTEKVDGDTQTTVEKDGLSTVTLVGIIVGVLLAIGFIGAIIVVVMRKMSGRYSP | |||||||||||||||||||
1 | 2hz6A | 0.07 | 0.07 | 2.82 | 0.51 | CEthreader | --PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPPAFLPDPNDGSLYTLEGLTKLPFTIPELVQASPCRLYMGKKQDIVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYP | |||||||||||||
2 | 2jlnA | 0.04 | 0.04 | 2.15 | 0.52 | EigenThreader | NASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQ--VFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASAHDLYAVALAVSFLTPDLMFVTGLIAALLL | |||||||||||||
3 | 2k1lA | 0.30 | 0.06 | 1.87 | 0.39 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------SRGLTGGEIVAVIFGLLLGAALLLGILVFRSRR------- | |||||||||||||
4 | 5jcss | 0.07 | 0.07 | 2.77 | 0.94 | SPARKS-K | KYGELSRAMRNRGVEIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFA----QVHDILLLSDEEPIEESLAAVIPISHLGEVGKWANNVLNCTEYSEKKIAERLYVFITFLTDMGVLEKINNLYK------ | |||||||||||||
5 | 2gifA | 0.22 | 0.05 | 1.56 | 0.62 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------INTLTMFGMVLAIGLLVDDAIVVVENVERVMAEGLPP | |||||||||||||
6 | 6w98A | 0.07 | 0.06 | 2.56 | 0.83 | DEthreader | FLGVVTRLWWALLIALRVLTT-TMVTMLAAAGMAGL----------AMRGMPARGRLVVLLIRLLILSTSLAWTGRLV-PRGGFGLTRDEVDSIPLT-PPET-LLTDARPGPDNPLGWDLPRLWV--RAR-GPQLRDLIQQPGTTVIKLPKPT-AIGALDGP | |||||||||||||
7 | 4zxjA | 0.09 | 0.09 | 3.32 | 0.79 | MapAlign | --DVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAGVAGDLYLTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRETLGGHSLLAMKLAAQLSRQVARQVT | |||||||||||||
8 | 6etxG | 0.15 | 0.15 | 5.17 | 0.62 | MUSTER | GLLARWLALFLSLKASYRLHQLRSWGAPEGYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSRRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWS | |||||||||||||
9 | 2kluA | 0.12 | 0.03 | 1.08 | 1.36 | HHsearch | --------------------------------------------------------------------------------------------------------------------------GPLVPRGSMALIVLGGVAGLLLFIGGIFFSVRSRHRRRQA | |||||||||||||
10 | 6lnaA | 0.12 | 0.12 | 4.33 | 0.44 | CEthreader | IPSSLFKAGVWGGETLLGHQFGVWAGQLGDGRGILLGEGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGALSIVTSDSPVYRETVEPGAMLMRVAPSYYRREPEKVRQLADFAIRHYWSHLADDKYRLWFTDVVARTASLIAQWQTVGFA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |