Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCSSSSHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCSSSSSCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCSSSSCCCCCCCCCCCCCSSSSSCCCCCSSCCCCCCCCCCCCSSCCCCHHHHHHHHCCCCCCSSSSCCCHHHHHHHHHHHHCCSSSSC MPAWIFVNRSLALGKIRCFGFDMDYTLADPRLPILLGKMKEVGKVFLATNSSYNYTNAIMTYLFSISEAEASGRPWRSYFDLIVVDTQKPHFFAEGLVLRQVNTDSGKLHVGTSTGPHQHCAVYSGGSSDMVCELLGVRGMDILYIGDHIFGDILKSKKRQGWRTCLV |
1 | 2j2cA | 0.55 | 0.47 | 13.55 | 1.17 | DEthreader | | ----------RVLAMICFGFDMDYTAVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFD-FPHGPSHRPWQSYFDLILVDA-RKPLFFGE-GTVLRQV-DTKLKIGT----------SGGS-SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLA |
2 | 2j2cA1 | 0.70 | 0.70 | 19.96 | 1.29 | SPARKS-K | | AYHRVFVNRSLAMEKIKCFGFDMDYTVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
3 | 2j2cA | 0.61 | 0.52 | 15.01 | 0.61 | MapAlign | | -IKCFGFDM---------DYTLAKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKYSGGS-------------SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
4 | 2j2cA1 | 0.61 | 0.61 | 17.39 | 0.64 | CEthreader | | KIKCFGFDMDYTLAVYKSLKEKEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
5 | 2j2cA1 | 0.70 | 0.70 | 19.80 | 0.98 | MUSTER | | AYHRVFVNRSLAMEKIKCFGFDMDYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
6 | 2j2cA1 | 0.71 | 0.71 | 20.29 | 1.79 | HHsearch | | AYHRVFVNRSLAMEKIKCFGFDMDYTLADGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
7 | 2j2cA1 | 0.69 | 0.68 | 19.47 | 1.65 | FFAS-3D | | --HRVFVNRSLAMEKIKCFGFDEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
8 | 4dfdA | 0.15 | 0.11 | 3.62 | 0.57 | EigenThreader | | GIKNLLIDLG---------GVLINLVDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYR-----TFKVEDYFEKTYLSYEMK------------------------------MAKPEPEIFKAVTEDAGIDPKETFFID-DSEINCKVAQEL-GISTYTP |
9 | 2xjeA | 0.70 | 0.60 | 17.09 | 1.91 | CNFpred | | ------------------------YVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV |
10 | 2j2cA1 | 0.55 | 0.47 | 13.55 | 1.17 | DEthreader | | ----------RVLAMICFGFDMDYTAVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFD-FPHGPSHRPWQSYFDLILVDA-RKPLFFGE-GTVLRQV-DTKLKIGT----------SGGS-SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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