Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCSSSSSSSSCCCCCCCCCCCCCCSSCCCCCCCSSSSCCCSSSSSSSSCCCCCCCSSSSSSCCSSCCCCCCSSSSCCCCSSSCSSSSSSSSSSCCCCSSSSSSSSCCCCCSSSSSSSSSSSSCCSSSSSCCCCCSSSSCCCSSSSSSSSCCCCCCSSSSSSCCCCCCCCCCCSSSSCCCCCCSSSSSSSSSSSSSCCSSSSSSSSSCCCSSSSSSSCCCCCCCCCCCCCCCSSSSSCSSSSSSSSSSSSSSSSSSSCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCC MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVVAAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVSSDEIWL |
1 | 6fwxB | 0.14 | 0.07 | 2.44 | 1.93 | FFAS-3D | | ----------------------------PPNFV-QRLQSMTVRQGSQVRLQVRVTG-IPTPVVKFYRDGAEIQSSLDFQISQEGD---LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQGETTQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISSGSPGVQISFSDG---RAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVK-------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 4u7mA | 0.14 | 0.11 | 3.80 | 1.08 | MUSTER | | ----------------------------KPQIITQ-PETTMAMVGKDIRFTCSAASSSSPMTFAWKKDNEVLTNADMENFVHVHVMEYTTILHLRQVTFGHEGRYQCVITNHFG-STYSHKARLTVNVLPSFTK--TPHDITIRTTTMARLECAATGHPNPQIAWQKDGGTDFPAARERRMHVMPDDD---VFFITDVKIDDAGVYSCTAQNSAGSISANATLTVLETPSLVVPLEVVSVGETVALQCKATGNPPPRITWFKGDRPLSLTER--HHLTPDNQLLVVQNVV--AEDAGRYTCEMSNTLGTERAHSQLSVLLENLY------------------------------------------ |
3 | 6efyA | 0.16 | 0.09 | 3.11 | 1.28 | SPARKS-K | | SEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFSEDTSSDVIVPEGSSVRLTCRA-RGYPEPIVTWRRED-----GNEIVLKDNVPSFRGEVLKLSKISRNEMGSYLCIASN-GVPPSVSKRISLSIHFHPVIQVPNQLVGAPL--GTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVRQKDDVGSYRCIAKNSLGEVDSSIRLYEIPH------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 6eg0B | 0.14 | 0.11 | 3.83 | 1.05 | MUSTER | | ----------------------PAEVIVDPKFS-SPIVNMTAPVGRDAFLTCVVQD-LGPYKVAWLRVDTTILTIQNHVITKNQSEHKTWTMRIKDIKESDKGWYMCQINTD---PMKSQMGYLDVVVPPDILDYPTSTDMVVREGSNVTLKCAATGSPEPTITWRRESGVPIELATGEEVMSIEGT----DLVIPNVRRHHMGAYLCIASNGVPSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINYWTRERGEIVPPGGKVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLGDTDGTIKLYRIPHHHHHH---------------------------------------- |
5 | 3lcyA | 0.17 | 0.08 | 2.80 | 2.00 | CNFpred | | -----------------------------PGIRKEM-KDVTTKLGEAAQLSCQIVGR-PLPDIKWYRFGKELIQSRKYKMSSDG---RTHTLTVMTEEQEDEGVYTCIATNE--VGEVETSSKLLLQATPQFHPGPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQN-SENITIENT-----EHYTHLVMKNVTHAGKYKVQLSNVFGTVDAILDVEIQDK------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 3b43A | 0.12 | 0.10 | 3.40 | 1.23 | SPARKS-K | | KGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGS-PEIKVLWYKDETEIQESSKFRMSFVESV---AVLEMYNLSVEDSGDYTCEAHNAAGSA--SSSTSLKVKEPPVFRKKPHPV--ETLKGADVHLECELQGTPPFQVSWHKDKRELR-SGKKYKIMSENF-----LTSIHILDSADIGEYQCKASNDVGSDTCVGSITLKAPPR--------------------------------------FVKKLSDISTVVGEEVQLQATIEGAEPISVA------WFKDKGEIVR--------ESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECF |
7 | 2va4A | 0.17 | 0.08 | 2.80 | 1.91 | FFAS-3D | | ----------------------------MPAIMPQKSFNATAERGEEMTFSCRASG-SPEPAISWFRNGKLIEENEKYILKGSN-----TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQL-----KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI--------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6efzA | 0.11 | 0.08 | 3.06 | 1.02 | MUSTER | | ---------------------------DLPKFGE-LLQNVTVPVSREAVLQCVVDN-LQTYKIAWLRVDTQTILTIQNHVITKNHRMRAWILRIRDVKESDKGWYMCQINTD---PMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATGSPTPTITWRREGGELIPLPNGAEAVAYNGS----FLTIAKVNRLNMGAYLCIASNGIPTVSKRVMLIVHFPPWIQNQLVGAALTQNITLECQSEAYPKSINYWMKNDTIIVPGERFVPETFESGYKITMR-YEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIP---------------------------------------------- |
9 | 3lcyA | 0.17 | 0.09 | 2.89 | 1.24 | SPARKS-K | | -----------------------AMSGEAPGIRKE-MKDVTTKLGEAAQLSCQIVGRP-LPDIKWYRFGKELIQSRKYKMSSDGRT---HTLTVMTEEQEDEGVYTCIATNEVG--EVETSSKLLLQATPQFHPYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTE------HYTHLVMKNKTHAGKYKVQLSNVFGTVDAILDVEIQDK------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 2nziA | 0.12 | 0.09 | 3.27 | 1.02 | MUSTER | | --------------------------AMAPHFKE-ELRNLNVRYQSNATLVCKVTG-HPKPIVKWYRQGKEIIADGLKYRIQEFKG-GYHQLIIASVTDDDATVYQVRATNQGG--SVSGTASLEVEVPAKIHLPEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRS---FTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPRGVKVSDVSRDSVNLTWTEGGSKITNYIVEKCAT---TAERWLRVGQARETRYTVINLFGKTS-------IAENKFGLSKPSEPSEPTITKE------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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