Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCSSSSSSCCCSSSSSCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCSSCC MDSLPDEFFVRHPAVEDQRKEETENKLEKSSGQLNKQENDIPTDLVPVNLLLEVKKLLNAINTLPKGVVPHIKKFLQEDFSFQTMQREVAANSQNGEEIVPALTLRFLITQLEAALRNIQAGNYTAHQINIGYYLTLLFLYGVALTERGKKEDYTEAENKFLVMKMMIQENEICENFMSLVYFGRGLLRCAQKRYNGGLLEFHKSLQEIGDKNDHWFDIDPTEDEDLPTTFKDLLNNFIKTTESNIMKQTICSYLDCERSCEADILKNTSYKGFFQLMCSKSCCVYFHKICWKKFKNLKYPGENDQSFSGKKCLKEGCTGDMVR |
1 | 6t3hA | 0.07 | 0.07 | 2.75 | 0.51 | CEthreader | | ------PSPYVGNLLNKWHDYIMQEKVHESIEKRTEIKQLLSQAEDNKDLVDYFILLDHRHSLCFDQEASMGDVVNMLSKGSHDLLINFYFELFAGDYEFFKKNYVKAISFYEKAEQKLSSIPNI----EETKFAEFHYKIGVAYYEIDQ---HLVSVNKVTKARDIYKKSDMWNLEAIQCSLVVGINLYDMGRLDDADAYFRDALTEALDHGYD--------------KPITKIYHNLGLVHWQKGSLELALHYFREAYSHEWLRDSPKGQQTVYMLSRVLYTMGQNEEAYHWYELGIEMARKFDDHEYKAKHDILYHLYEQP |
2 | 6mfvA | 0.08 | 0.07 | 2.93 | 0.75 | EigenThreader | | EYEGIKFLYDRNPFVPLYSLMKKEVYLRHVNFLLKSKAFKYAIKVGSSELIRNLVELRVKEFYRIIVDFPRMYQRLLMEVEDKIEIAIIEVQRGLFEKAIKLLKEAWLADAYMEERYLKKTKEIVEKINDMYAWFSYYAEKTKYEYYKNSREALKSALKELEIIRKIGD-----PEKEGLVLLHVGDIYLHMGNYEKGISYYQEALKMAKAYG--------------IKFLEHISYMELAKGYYQLKLGSVSYIATKNLEKAEKFAKEMIRIAQSTD---YPLAWAGYIFLAAVDFLKGDDWREDYNLGKAHLKEYPWLFEAVL |
3 | 3ulqA | 0.09 | 0.06 | 2.34 | 0.84 | FFAS-3D | | ----SSSIGEKIMYIRRFSIPDAEYLRREIKQELDQMEED--------QDLHLYYSLMEFRHNL---MLEYLEPLIEEQPRLSDLLLEIDKKQARLTGLLEYYFNLSAIKFFKKAESKLIFVK------DRIEKAEFFFKMSESYYYMKQTY---FSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYSQSQYEDAIPYFKRAIAVFE--------------------------------------------------------------------------------- |
4 | 4gyoA | 0.10 | 0.09 | 3.45 | 0.79 | SPARKS-K | | ---PSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENLLYFSLMEFRHRIMLDKLMPVKPFSDMLNEIESNLTNFILAIDHYKHAEEKLEYVKVAEVYYHSMNYASQALDIYTKYELYG-----RRRVQCEFIIAGNLTDVYH---HEKALTHLCSALEHARQLEE-AYMIAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQ-----QAVQEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTECFDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQR |
5 | 5a6cA | 0.11 | 0.05 | 1.91 | 0.81 | CNFpred | | -------------------------------------------------AIVCCQRHLDISREL-----------NDKVGEARALYNLGNVYHAKGKSFGVRDALQAAVDFYEENLSLVTAL-------DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG----DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL-------------KDRAVEAQSCYSLGNTYT--------------------------------------------------------------------------------- |
6 | 6h02A | 0.08 | 0.06 | 2.59 | 0.83 | DEthreader | | VTIRLYPEGKL---ATLEPCPVLEDVASFPMVLQFISGIHNSTFPMGALVETIYG-----IPLPGTN--C--M--AS--GSIT-PL--PM-NL---LDSLTV--KMSLIHSIATRVIKLAH-AKSSVSHAWGILHTLLEMFSYRMHHIQ-PHYRVQLLSHLHTLAAAQTNQNQLHLCESTALRLITALGSSEVLILTLRT--LDRLILILLNDFR---MYHKKYPENVCLRLLYFHDRPVTYLYNTHLHTCLLVENITAWMNAGLITA-PE--WIVLTLALAHVWSGQLSLIPKLTRCMIEIGVAFYD---------------- |
7 | 4a1sA | 0.09 | 0.08 | 2.97 | 0.82 | MapAlign | | -----------GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQY-----HKHDLTLAKSMDRLGEAKSSGNLFDEAAICCERHLTLAR------QLGDRLSEGRALYNLGNVYHAKGKKEALTRAVEFYQENLKLMRDL-GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAR--------------EFGDRAAERRANSNLGNSHIFLGQFEAEHYKRTLALAVELGEREVEAQSCYLGLHEFNTAIYHACWSLGNAHSAIGGHERALKYAEQHLAGGGGGGGGGG |
8 | 4gpkA | 0.09 | 0.09 | 3.36 | 0.76 | MUSTER | | LDEWLNALVHLDKQQVERIYEELQGEMKHVLDFEIINYYKLLYTRYLIMKISALEEELDKLKKVYKKYSPLLCCLQRWKDGLDYLLKTEVMAKEQTGLYYNIALAYTHLDIHHLAIHFVNMALEGFRSEKFRNIINCQILIAVSYTEKGQYEEALKMYESILRE---ATSFADKDVLLAITLSNMGSIYYKKGKYQQAKKYYLDSLQLQKQIDLNYLDT---IKLEELEEARTLIDKGIDAAKQEERFNAK--LYLLLMLRYKYFEEAKDYKAFLENE--AIPLYKVYVELAEHFSSLSRFEESNRYYRLVI--------DLMN |
9 | 4nq0A | 0.10 | 0.06 | 2.41 | 0.62 | HHsearch | | --------TSR-----HKVQIDMEKFLEAAKRCQQTLDDGLLPDPELAQAVYNMEVQNSKEEERL--ALHE-----LANFSPA---NEHDDEISGFHIYFENDLYENALDLLAQALMLLGRPTADGQSENRLRIGDVYILMGDIEREAEMF---SRAIHHYLKALGYYKTPV--TEKVIQAEFLVCDALRWVDQVKDKLKRFKHAKALLEKTTR----PK-DSEL-QQARLAQIQDDIDEVQENQQH----------------------------------------------------------------------------- |
10 | 3q15A | 0.07 | 0.07 | 2.74 | 0.46 | CEthreader | | -AIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPTVTELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVS------DDIEKAEFHFKVAEAYYHMK---QTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN--------------DRFIAISLLNIANS-----YDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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