Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPPLALFLCGLLANRQSVVMVEEWRRPAGHRRKDPGIIRYMCSSVLQRALAAPLVWILLALLDGKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDELVRDSPARKAVSRYLRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCCEHARDFAHRCVLHFFASMRSELQARGLRRGNAGRRLELPAVPEPPEGLDSGSGKAHLRAISSREQVDRLLSTWYSSKPPLDLAASPGLCGGGLSHRAPTLALGTRLSQHTDV |
1 | 6ytkA | 0.26 | 0.15 | 4.67 | 0.83 | DEthreader | | -TL-NNIVSSLQRN-GIFINSLIAALTIGGQQLFSSSTFSCPCQVGKNFYYGSAFLVIPALILLVAGFALRSQMWTITGEYC-C----PLECKLACLRFFSITGRAVIAPLTWLAVTLLTGTYYECAASEFASV-DHYPMFDNVSSKREEILAGFP--CCRSAPSDLVRDEIALLHRYQSQMLGWILITLATIAALVSCCVAKCCSPLTSLQ------------------------------------------------------------------------------------------------------------------------------------ |
2 | 6uivA | 0.28 | 0.23 | 7.03 | 2.76 | SPARKS-K | | --------------DVMIFNGLVALGTVGSQELFSVVAFHCPCSPARNYLYGLAAIGVPALVLFIIGIILNNHTWNLVAECQHRRTKNCSAAP-TFLLLSSILGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAREHFPSAHATEILARFPCKE-NPDNLSDFREEVSRRLRYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDDEELIANFPVEG---------TQPRPQWNAITGVYLYRQGLPLYSRLHKWAQGL----------------------------------- |
3 | 6uivA | 0.28 | 0.23 | 7.02 | 1.03 | MapAlign | | --------------VMIFNGLVALGTVGSQE-LFSVVAFHCPCSPARNYLYGLAAIGVPALVLFIIGIILNNHTWNLVAECQ-HRRTKNCSAAPTFLLLSSILGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAREHFPSAHATEILARFPCKENPDNLS-DFREEVSRRLRYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGF-------VALNKDDEELIANFPVEGTQPRPQWNAITGVYLYRENQGLPLYSRLHKWAQ------------------------------------- |
4 | 6uivA | 0.28 | 0.24 | 7.19 | 0.92 | CEthreader | | --------------DVMIFNGLVALGTVGSQELFSVVAFHCPCSPARNYLYGLAAIGVPALVLFIIGIILNNHTWNLVAECQHRRTKNCS-AAPTFLLLSSILGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAREHFPSAHATEILARFPCKENPDNL-SDFREEVSRRLRYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDDEELIANFPVEGT-------QPRPQWNAITGVYLYRENQGLPLYSRLHKWAQGL----------------------------------- |
5 | 6uivA | 0.28 | 0.23 | 7.10 | 2.14 | MUSTER | | --------------DVMIFNGLVALGTVGSQELFSVVAFHCPCSPARNYLYGLAAIGVPALVLFIIGIILNNHTWNLVAECQHR-RTKNCSAAPTFLLLSSILGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAREHFPSAHATEILARFPCKEN-PDNLSDFREEVSRRLRYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDDEELI---------ANFPVEGTQPRPQWNAITGVYLYRQGLPLYSRLHKWAQGL----------------------------------- |
6 | 7d60A | 0.22 | 0.18 | 5.70 | 5.17 | HHsearch | | MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCS-TENMTYGLVFLFAPAWVLLILGFFLNNRSWRLFTGCCVNPRKPRGHSCRFFYVLGQITLSSLVAPVMWLSVALLNGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLPT--VNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSERNLKCFFENKRPDP----FPMPTF----------------AAWEAASELHSFHQSQQHYSTLHRVVDNG----------------------------------- |
7 | 6lmtA | 0.48 | 0.35 | 10.22 | 3.04 | FFAS-3D | | ------MFQFLQSNQESFMNGICGIMALASAQMYSSFEFSCPCMPEYNYTYGIGLLIIPPIWFFLLGFVLNNNVSVLAEEWKRPTGRRTKDPSVLRYMLCSITQRSLIAPAVWVSVTLMDGKSFLCAFSINLDIEKFGNVIGMTETEKLKFLARIPCKD--LFEDNEVRVAATRYIKCISQACGWMFLLMMTFTAFLIRAIRPCFTQAAFLKTKYWSHYIDIERKMFDETCKEHAKSFAKVCIHQYFENISGEMQNFH-------------------------------------------------------------------------------------- |
8 | 6ytkA | 0.21 | 0.16 | 5.17 | 1.25 | EigenThreader | | TLNNIVSSLQRN---GIFINSLIAALTIGGQQLFSSSTFSCPCQVGKNFYYGSAFLVIPALILLVAGFALRSQMWTITGEYC-----CPLECKLACLRFFSITGRAVIAPLTWLAVTLLTGTYYECAASEFASVDHYPMFDNVSASKREEILAGFPCCRSAPSDVILVRDEIALLHRYQSQMLGWILITLATIAALVSCCVAKCCSP---------------------------------------------------------------------LTSLQHCYWTSHLQNERELFEQAAEQHSRLLMMHRIKKLFGFIPGSEDVKHIRIPSCQDWKDISVPTL |
9 | 7d60A | 0.22 | 0.18 | 5.70 | 1.69 | CNFpred | | MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCST-ENMTYGLVFLFAPAWVLLILGFFLNNRSWRLFTGCCVNPRFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALLNGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLP--TVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSERNLKCFFENKRPDPFPM--------------------PTFAAWEAASELHSFHQSQQHYSTLHRVVDNG----------------------------------- |
10 | 6uivA | 0.30 | 0.17 | 5.20 | 0.83 | DEthreader | | -------------DVMIFNGLVALGTVGSQELF-SVVAFHCPCSPARNYLYGLAAIGVPALVLFIIGIILNNHTWNLVAECQHRR-TKNCSAAPTFLLLSSILGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAREEHFPAHATEILARFP--CKENPDLSDFREEVSRRLRYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQE----------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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